Raphanus sativus (radish): 108855412
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Entry
108855412 CDS
T06014
Name
(RefSeq) cysteine--tRNA ligase 2, cytoplasmic
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108855412
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108855412
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108855412
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
108855412
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class I (G)
108855412
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108855412
Prokaryotic type
108855412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
CysS_C
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
108855412
NCBI-ProteinID:
XP_056865513
UniProt:
A0A9W3DPP4
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Position
4:complement(29644248..29646752)
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AA seq
511 aa
AA seq
DB search
MEAEKMELKLYNTMTQQKEVFTPINPGKVGLYVCGITAYDFSHIGHARAAVSFDVLYRYL
KHLSYEVNFVRNFTDVDDKIIIRANENGEEPLELSNRFCEEYLVDMGALQCLLPTHQPRV
SDHMDHIVDMIQKIIEKDCGYAVDGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDSRK
RNPADFALWKAVKPGEPSWDSPWGRGRPGWHIECSAMSAHYLSPKFDIHGGGADLKFPHH
ENELAQTCAACEDGGVNYWLHNGHVTINNEKMAKSKKNFKTIREMTESYHPLALRHFLMS
AHYRSPLSFSASQLDSSSEALYYVYQTLQDLNDALLPYREAMSEDSGKSEQTAEAKEIIN
KLKSEFEGKMLDDLNTAHILTGAYQDALKFINASIGKLKKMQKKQRMSLLVSLVEIEKTA
REVLDVLGLLTTLSYAEILEEMKQKTLTRAGLSEEDISQKIEERITARKNKEFEKSDQIR
AELTVKGIALMDIGKETVWRPCFPLQANSSD
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagaagatggaactgaagctctacaacacgatgacgcagcagaaggaagtt
ttcactccgatcaaccccggcaaagtcggattgtacgtctgtggaatcactgcttacgat
ttcagccacatcggccatgctcgcgccgccgtttccttcgacgttctctacagatacttg
aagcatctgtcttatgaagttaatttcgtcaggaatttcacagatgttgatgacaagata
ataatacgtgctaatgagaatggagaggaaccgttggagttgagtaatcggttttgcgag
gagtatttggtagatatgggtgctcttcagtgcctcctccccacccaccagcctcgtgtc
agcgaccatatggatcacattgtagacatgattcaaaagatcattgagaaagattgtggg
tatgctgtggacggcgatgtgttcttctctgttgacaaatcaccaaactatggtaagttg
tcgggtcagttgctggaacatacacgggctggtgagagagttgcggttgattcgagaaag
cgtaaccctgctgattttgcattatggaaggctgtaaaacctggtgagccgagttgggat
agcccgtggggccgaggaagaccgggatggcacatcgagtgcagtgccatgagtgctcac
tatctgtctcccaagttcgacattcatggtggtggtgcagatttgaaattcccgcaccat
gaaaatgagcttgctcagacatgtgctgcgtgtgaggatggtggtgtgaattactggttg
cataatgggcatgtcactatcaataacgagaagatggcaaaatcaaagaaaaacttcaaa
actatcagagaaatgacagaaagttaccatccactggctctgaggcacttcttgatgagt
gctcactaccggtctcctctgagcttctcagcgtctcagctagacagttcctcggaagct
ttgtattatgtttatcagacattgcaagatcttaatgatgctctcctgccatatcgagaa
gcaatgtctgaagactctggaaaatctgaacagacagcagaagccaaagagatcatcaac
aagctcaaaagtgagtttgaaggaaagatgttagacgatttgaatactgcccatatactc
acgggtgcttaccaagatgcattgaagttcatcaatgcttccattggcaagctcaagaaa
atgcagaagaaacagaggatgtcactgcttgtgtcactcgttgagattgagaaaacagca
agggaagttctggatgtgcttggtttgctcactaccctgagctatgccgagattttggaa
gaaatgaaacagaaaacactaacaagggcaggattgagcgaagaagacatttcacaaaag
atagaagaaaggataacggcaaggaagaacaaagagtttgagaaaagtgatcagattaga
gcagaactgacggttaaaggaatagcattgatggatattggcaaagaaactgtgtggaga
ccatgcttccctcttcaggctaattccagtgattaa
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