KEGG   Raphanus sativus (radish): 108855487
Entry
108855487         CDS       T06014                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03030  DNA replication
rsz03410  Base excision repair
rsz03420  Nucleotide excision repair
rsz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108855487
   03410 Base excision repair
    108855487
   03420 Nucleotide excision repair
    108855487
   03430 Mismatch repair
    108855487
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsz03032]
    108855487
   03036 Chromosome and associated proteins [BR:rsz03036]
    108855487
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108855487
DNA replication proteins [BR:rsz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    108855487
  DNA Replication Termination Factors
   ELG1-RFC complex
    108855487
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    108855487
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     108855487
  Check point factors
   HRAD17(Rad24)-RFC complex
    108855487
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Sigma54_activ_2 AAA_22 ABC_tran Mg_chelatase DUF815 AAA_5 AAA_29 RuvB_N AAA_23 RsgA_GTPase AAA_24 AAA_16 AAA_2 T2SSE nSTAND3 ATPase_2 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 108855487
NCBI-ProteinID: XP_018484832
UniProt: A0A6J0NJ99
LinkDB
Position
4:complement(11065979..11068916)
AA seq 354 aa
MLWVDKYRPKSLDKVIVHEDIAHNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLKQIYG
PSAEKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSR
CLNVRINAPSQEEIVKVLEFVAKKESLQLPHGFAGRIAEKSNRSLRRAILSLETCRVQNY
PFTDNQVISPMDWEEYVAEIAIDMLREQSPKSLFQVRGKVYELLVNCIPPEVILKRLLHE
LLRKLDSELKLEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKNFLISTFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtggacaagtaccggccgaaatcgctggataaggtcatcgttcatgaggat
atagctcacaatctcaaaaaattggttacggagcaagattgtccgcatctgctcttctat
gggccgtcaggctctggtaagaaaaccctaatcatggcgcttctcaagcagatatatggt
cccagtgctgagaaggtgaaagtggagaacagggcatggaaagttgatgctgggagtaga
actattgatctggagctcactacattatcaagcaccaatcatgtggagcttactccaagc
gatgcaggctttcaggacaggtacatcgttcaagagatcattaaagaaatggccaagaac
agaccaattgacaccaaaggaaagaagggctacaaggtgttggtactaaatgaagttgac
aagctctcacgagaagcacaacattctctgcgaagaacaatggagaaatatagctcatct
tgccgtctcatcttatgctgtaacagttcttcaaaggttacagaagccatcaagtctcgt
tgtctcaatgtgcggataaatgcaccttcgcaggaagagatagtgaaagtgttggagttc
gttgcaaagaaagaaagcctgcaactacctcacggttttgctggtcgtattgccgagaaa
tcaaatcgcagtctaagaagagctattctgtcacttgagacttgtcgtgtccaaaactat
ccgttcacagataaccaagtgatatctcccatggattgggaagagtatgttgccgaaata
gcaattgacatgctgagagaacagagccctaaaagtttgtttcaggtacgcgggaaggta
tatgagctgctagttaattgcattccaccagaagtcatactgaagaggcttcttcatgaa
ttgctgaggaaactggactcagagctaaagcttgaagtctgccactgggccgcatattat
gaacataggatgagattgggtcagaaagccatatttcacatagaagcatttgtggccaag
tttatgagcatatacaagaacttcctcatttcaacatttgggtag

DBGET integrated database retrieval system