Raphanus sativus (radish): 108855544
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Entry
108855544 CDS
T06014
Name
(RefSeq) homeobox-leucine zipper protein ATHB-14
KO
K09338
homeobox-leucine zipper protein
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108855544
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
108855544
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
START
MEKHLA
Homeodomain
bZIP_1
ZPR
Speriolin_N
Homeobox_KN
SNAPC5
KIP1
CCPG1_N
Motif
Other DBs
NCBI-GeneID:
108855544
NCBI-ProteinID:
XP_018484893
UniProt:
A0A6J0NMB6
LinkDB
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Position
4:complement(38932935..38937756)
Genome browser
AA seq
850 aa
AA seq
DB search
MMVHTMHRESPDKGLDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIE
PKQIKVWFQNRRCREKQRKEAARLQTVNKKLNAMNKLLMEENDRLQKQVSHLVYENGHMK
HQIHTASGTTTDNSCESVVVVSGQQHQHQQQNPNPQRLQRDANNPAGLLSIAEEALAEFL
SKATGTAVDWVQMIGMKPGPDSIGIVAISRNCSGIAARACGLVSLEPTKVAEILKDRQSW
LRDCRSVDTLSVIPAGNGGTIELIYTQMYAPTTLAAARDFWTLRYSTCLEDGSYVVCERS
LTAATGGPTGPPSSNFVRAEMRPSGFLIRPCDGGGSILHIVDHVDLDALSVPEVMRPLYK
SSKILAQKMTVAALRHARQIAQETSGEVQYGGGRQPAVLRTFSQRLSRGFNDAVNGFVDD
GWSPMGSDGGEDITVMINLSPGKFGGSQYSNNSFLPSFGSGVLCAKASMLLQNVPPAVLV
RFLREHRSEWADYGVDAYAAASLRASPFAVPCARAGGFPSNQVILPLAQTVEHEEFLEVV
RLEGHAYSPEDMGLARDMYLLQLCSGVDEDVVGGCAQLVFAPIDESFADDAPLLPSGFRV
IPLEQKSTPNGASVNRTLDLASALEGSTRQAGEADPNGCNFRSVLTIAFQFTFDNHTRDN
VASMARQYVRNIVGSIQRVALAIAPRPGSCISPVSAPTSPEALTLVRWISRSYRVHTGAD
LFGSDSQTSGDTLLHQLWSHTDAILCCSMKTNASPIFTFANQTGLDMLETTLLALQDLTL
DKTLDESGRKALCSEFPKIMQQGYAHLPAGVCASSMGRLVSYEQATVWKVLEDDESNHCL
AFMFVNWSFV
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgatggtccacacgatgcacagagagtccccggacaaagggttggactccggcaagtac
gttaggtacacgcctgagcaagtggaagctcttgagagagtttacactgagtgccctaag
cctagctctctcagaagacagcaactcatacgagaatgtcctattctctccaacatcgag
cctaaacagatcaaagtctggtttcaaaaccgcagatgtcgagagaagcagaggaaagaa
gccgctcgtctccagacagtgaacaagaagctcaatgctatgaataaactcctgatggaa
gagaatgatcgtttgcagaagcaagtttctcacctggtctatgagaatggccacatgaaa
caccaaatccacactgcttctgggacgaccacagacaacagctgtgagtctgtggtcgta
gtaagtggtcagcaacatcaacatcaacagcaaaacccaaatcctcagcgtctccaacga
gatgctaacaacccagctggtctcctttccatagcagaggaggccctagcagagttcctt
tccaaggctacaggaactgctgttgactgggttcagatgattgggatgaagcctggtccg
gattctattggcatcgtcgctatttcccgcaactgcagtggaatcgcagcacgtgcctgc
ggcctcgtgagtttagagcccacgaaggttgctgagatcctcaaagatcgtcaatcttgg
ctacgtgattgtcgaagcgtggatactctgagtgtgattcctgctggtaacggtgggact
atcgagcttatatacacgcagatgtatgctccaacgacgttagcagcggctcgtgacttc
tggacgctgagatacagcacttgtttagaagatggaagctatgtggtttgtgagaggtcg
cttactgctgcaactggtggacccactgggccaccttcttcgaactttgtgagagctgag
atgcgaccaagcgggtttctcatccgtccttgcgatggtggtggttccattctccacatt
gttgaccatgttgatttggatgccttgagtgtccctgaagtcatgaggcctctctataaa
tcttccaagattcttgctcagaaaatgactgtcgctgcgctgagacatgcaagacaaatc
gcacaagagacaagtggagaagttcagtacggtggagggcgccaacctgctgttttaaga
accttcagtcaaagactctctcggggattcaatgatgctgtgaatggctttgtggatgat
ggatggtcaccaatgggtagtgacggtggtgaggatattacagttatgataaacttgtct
cctggaaagtttggtgggtctcaatacagcaacaactcgttcctccctagctttggtagt
ggtgtgctttgcgccaaggcatctatgctgttgcagaacgttccacctgctgtgctggtt
cgtttccttagagaacaccgttctgagtgggctgattatggtgtggatgcttatgctgct
gcatcccttagagcaagtccttttgctgttccttgcgctagagctggtggcttccccagt
aaccaagtcattctccccctcgctcagacagttgaacatgaagagtttcttgaggtggtt
agactcgaaggtcatgcttactcacctgaagacatgggcttagctagggatatgtactta
ctacagctttgtagcggtgttgatgaagatgtggttggaggttgtgctcagcttgtcttt
gctcctatcgatgaatcatttgctgatgatgcacctttgcttccttctggctttcgtgtc
atacctcttgaacaaaaatcaactccgaacggtgcatctgtgaaccgtacattggatcta
gcatcagcgttagaaggatcaacacgtcaagcaggtgaagctgacccaaacggttgtaac
tttaggtcggtattaaccatagcattccagttcacatttgataaccacacaagagacaac
gttgcttccatggcacgtcagtacgtgagaaacatagtgggatcgattcagagggttgct
ctagccattgctccccgtcctggttcttgtatcagtccagtatctgctcccacttcccct
gaagctctcactcttgtccgttggatctcccgtagttacagagttcacactggtgcagat
ctctttggctctgattctcaaaccagtggtgacacattgctgcaccaactctggagccat
accgatgcaatcttgtgctgctccatgaaaacaaatgcttcaccgatctttacatttgct
aaccaaactggtttagacatgctggaaactactctcctagcacttcaagacctaacgcta
gacaagaccttagacgagtctggtcgtaaagctctttgctctgagttccctaagatcatg
caacagggctatgctcatcttcctgcgggtgtgtgtgcgtcaagcatggggagattggtg
tcttacgagcaggcaacagtgtggaaagttcttgaagatgatgaatcaaaccactgctta
gctttcatgttcgttaattggtccttcgtttga
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