Raphanus sativus (radish): 108855669
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Entry
108855669 CDS
T06014
Name
(RefSeq) oxysterol-binding protein-related protein 1C isoform X1
KO
K20456
oxysterol-binding protein 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108855669
Membrane trafficking [BR:
rsz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
108855669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
PH_11
PH
PH_8
PH_13
Motif
Other DBs
NCBI-GeneID:
108855669
NCBI-ProteinID:
XP_018485044
UniProt:
A0A6J0NKB0
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All DBs
Position
9:16456578..16460282
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AA seq
793 aa
AA seq
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MHPFCCVSDHSPSMASLPEQPPLGVTRSEPMMTRSASQSSNRQSSRQVLQSLSFNHQSDV
ANLLALPALAIREPPVDVKINDIVGNGIAGILHKWVNYGRGWRPRWFVLQDGVLSYYKIH
GPDKIFVSPETEKGSKVIGEESTRMIARHHNKHGGNSSTSQLRRKPFGEVHLKVSSVRES
RSDDKRFSIFTGTKRLHLRAETREDRATWVEALLAVKDMFPRMSNSELMAPVNNLAISAE
KLRQRLVDEGVSELAIQDCEQIMRSEFSALQSQLVLLKQKQWLLIDTLRHLETEKVDLEN
TVVDESQRHTENEGPNDLRNEKFSEGTATESDDDNERGDAETDEEDHTFFDTRDFLSSSS
FKSSSSGFRTSSFSSDDDGFGSEDDTDPSIKSVGFNYPRVKRRKSLPDPVEKEKSVSLWS
MIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEDLEYSYLLDRAFEWGKRGNSLMRILNVAA
FAVSGYASTEGRICKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVLACHCDGTGWKFW
ADSNLKSKFWGRSIQLDPVGVLTLQFDDGEILQWSKVTTSIYNLILGKLYCDHYGTMRIE
GSAEYSCKLKFKEQSIIDRNPHQVHGIVQDKSGKTVATMFGKWDESMHYVTGDCSGKGKL
SEDMSGAQVLWKRSKPPGNTTKYNLTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENG
EFEMANTEKLRLEQRQRQARKMQERGWKPRWFTKEKGSEAYRYKGGYWEARERGSWDNCP
DIFGHIDSEQQIE
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctttctgctgcgtctcggatcactctccttcgatggcgtcgttgcccgaacaa
ccgcctctcggtgtgacacgatccgaacctatgatgactcgatctgcttctcagagttct
aaccgtcaatcaagtcgtcaagtcctccaaagtctatccttcaaccaccagagtgacgtg
gcgaatctgctagccctaccggcgttggcgattagagaaccgccggttgatgtgaagata
aacgatatcgtagggaacggaatcgctggaatactgcataagtgggtgaattacggtaga
gggtggagaccaaggtggttcgtgttgcaggatggtgttctttcctattataaaatccat
ggacctgataagatctttgttagtcctgaaactgaaaagggatccaaagtgatcggagaa
gagtccactcgtatgattgctaggcaccacaacaagcatggtggaaacagctccacttcc
caactccgtcgcaagccattcggagaagtacatctcaaggtttcttcagtacgggagagt
agatcagatgataagaggttttccatattcactggcaccaagaggctccacttgcgagca
gagactcgagaggaccgagcaacctgggttgaggcactgctagctgtcaaagatatgttt
ccaaggatgtctaacagtgaattgatggcgccggtcaacaatttggccatctccgcggag
aagcttcggcaacgtttggttgatgaaggagttagtgagttagctattcaggactgtgag
caaattatgaggtctgagttctcagcacttcagagccagttggtgcttcttaagcagaag
cagtggcttctcattgacacccttcggcatttagagacagaaaaggtagatcttgagaac
acagttgtagatgagagccaaagacacactgaaaatgaaggtcccaatgatttaagaaac
gagaagttcagtgaagggactgccactgaatctgatgacgataatgagcgaggcgatgca
gaaacggatgaggaagaccacactttttttgatacacgtgactttctttcttcaagttct
ttcaagagtagtagttctggctttcgtacatcgtcgttttcttctgatgatgatggcttt
gggtcagaagatgatactgatccttccatcaagtctgttggattcaactatcctcgcgtc
aaaaggaggaagagtttacctgatcctgttgaaaaagagaaaagtgttagcctttggtca
atgatcaaagacaatataggcaaagatctcacaaaagtttgtctacctgtttacttcaac
gagccactatcttccctacagaagtgttttgaggatttggaatattcataccttcttgat
cgagcatttgaatggggcaaaaggggaaatagcctcatgaggattcttaatgtcgctgct
tttgctgtatctgggtatgcatctacggaaggaagaatctgcaaaccttttaacccactg
ctaggtgaaacatacgaggcagattatccagacaaaggacttcgatttttctccgaaaag
gtcagtcatcatcctatggttttggcatgccattgcgatggtacgggatggaaattctgg
gcagacagcaatctgaagagcaaattttggggtcggtcgattcagcttgatcctgttggt
gtgttgactttgcaatttgatgatggagaaatccttcagtggagtaaggtgactacatcg
atatacaatctcatacttggtaaactttactgtgatcactatggcactatgcgtatcgag
ggcagtgctgaatactcttgtaaacttaaattcaaagagcagtcgatcattgaccgaaat
cctcaccaggttcatggtatagttcaagacaagagtgggaagacagtggcaacgatgttt
gggaaatgggatgagagcatgcactatgtgacgggtgattgttctggaaaggggaaactg
agcgaagatatgtcaggagctcaagttctctggaaacggagcaaaccccctggaaacaca
acaaagtataatctaacacgtttcgcaatcacgctgaacgagcttacacctgggctgaag
gagaagttgccaccaacagattcaaggctgagaccagaccagaggtatctggaaaacggt
gagtttgaaatggccaacacagagaagttgcggctggaacagcgacaacgtcaggctagg
aagatgcaggagagaggatggaagccgaggtggttcacgaaagagaaaggaagcgaggct
taccgatacaaaggagggtactgggaagcccgcgagagaggatcatgggataactgtcca
gatatcttcggtcacatcgattccgaacaacaaattgagtaa
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