KEGG   Raphanus sativus (radish): 108855919
Entry
108855919         CDS       T06014                                 
Name
(RefSeq) autophagy-related protein 18a
  KO
K22991  WD repeat-containing protein 45
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108855919
Membrane trafficking [BR:rsz04131]
 Autophagy
  Other autophagy associated proteins
   Others
    108855919
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 BCAS3_WD40 WDR55 Beta-prop_IFT140_2nd Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_HPS5 Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd DUF7099 PEP5_VPS11_N Ge1_WD40 Beta-prop_RSE1_2nd Nucleoporin_N
Other DBs
NCBI-GeneID: 108855919
NCBI-ProteinID: XP_018485348
UniProt: A0A6J0NL14
LinkDB
Position
4:50333221..50335851
AA seq 421 aa
MATVSSSDASPWPIDSTSASDSDSTLPSHHRDPGDDTESLDSFSSMSLNSEEVPHNPNPN
PDSNIQTPLPSLLHLSFNQDHACFAVGTDRGFRILNCDPFREIFRRDFDRGGGVAVVEML
FRCNILALVGGGPDPQYPPNKVMIWDDHQSRCIGELSFRSDVRSVRLRRDRIIVVLEQKI
FVYNFADLKLLHQIETIANPKGLCAVSQGAGSMVLVCPGLQKGQVRIEHYASKRTKFVMA
HDSRIACFALTQDGHLLATASSKGTLVRIFNTVDGTLRQEVRRGADRAEIYSLAFSSNAQ
WLAVSSDKGTVHVFGLKGNSGAQVKDTPRIASELTRTSSSPSSSLSLFKGVLPKYFSSEW
SVAQFRLVEGTQYIVAFGHQKNTVVILGMDGSFYRCQYDPVNGGEMTQLEYHNCLKPPSV
F
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggccaccgtctcctcctccgacgcttctccctggccaatcgattcaacctccgcctca
gattccgactctactctcccctctcaccaccgcgatcccggagacgacaccgagtccctc
gattccttctcctccatgagcctcaactccgaagaggtccctcacaatcccaatcccaat
cccgattccaacatccaaacgcctctcccgtcgctcctccacctctccttcaaccaagac
cacgcctgcttcgccgtcggcaccgaccgcggcttccgcatcctcaactgcgatcccttc
cgcgagattttccgccgcgatttcgatcgcggcggcggagtcgccgtcgtggagatgctc
ttccgatgcaacatactcgcgctcgtcggcggcggacccgatccgcagtatcctcccaac
aaggtcatgatctgggacgatcaccagagccggtgcatcggagagctctccttcaggtcc
gatgttcgatccgttaggctcaggagggatcggatcatcgtcgtcctcgagcagaagatc
tttgtctacaacttcgcggatcttaagctgttgcaccagattgagacgattgcgaaccct
aagggactgtgtgcggtctctcagggtgctggctctatggtgttggtgtgccctggtttg
cagaaaggacaagtgaggatcgagcactacgcttcgaagcggactaagttcgttatggct
catgattccaggattgcttgctttgctctcacgcaggatgggcatttgttggctacggcg
agctctaagggtactcttgttcggatcttcaatactgttgatggtaccttgcgtcaagag
gttaggaggggtgcagatagagcagagatatatagtctggctttctcttcaaatgctcag
tggttagctgtctcgagtgacaaaggaaccgtccatgtctttggtctcaaaggtaactcc
ggtgctcaggtgaaagacacaccccgaattgcatctgagcttactcgtacttcctcatcc
ccatcctcgtccctgtcattatttaaaggagtgttgcccaagtatttcagctcggagtgg
tcggtggctcagttcaggttggttgaaggaactcaatacatagtcgcctttggtcatcag
aagaacactgttgttattcttggcatggatgggagcttctacagatgccagtatgatccg
gtgaatggaggagaaatgactcagcttgagtatcacaactgtctaaaaccgccttctgtt
ttctag

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