Raphanus sativus (radish): 108855938
Help
Entry
108855938 CDS
T06014
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108855938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108855938
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108855938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
AAA_16
Urb2
Motif
Other DBs
NCBI-GeneID:
108855938
NCBI-ProteinID:
XP_056865085
UniProt:
A0A9W3DMM5
LinkDB
All DBs
Position
4:complement(38290495..38293720)
Genome browser
AA seq
811 aa
AA seq
DB search
MVGTDSFLPFSRARNMPWILRSRSKSISQSELAKRPDPFFLPDLLDGFEETKYGWLADDV
RRLCELKRNLLNGSVSSVEDVVITRRQQKKEKPVKLDDVLLSQESVTSGDYSGSDACPEG
YNEEDSSKTPPTDYYDNETHVFRDVVAEEEAELWRQMAFAQESSSKVTVENLQDNDPKQV
EDCEHSFIYKDDVGEVCRVCGLIKTPIERIIEVVYYNKPKRSKRTYIREQEEDTEEETRM
DFSSSQTNNNILGDKMFIHPRHDKEMKPHQIEGFKFLCNNLASNEPGGCILAHAPGSGKT
FLLISFLQSFMAMDPDAKPLIVLPKGIIESWKREFTKWAVENIPLYDLYSVKAESRRQQL
NVLRTWVEQRSILFLGYQQFAKIICDDSFNTDECSEDCKRILLEKPTLLILDEGHTSRND
ETNILIALARVKTRRKVVLTGTLFQNNVKEVFNILNLVRPRFLKRHREIVSRIMSKAEIP
SGKHLNQSSIENTFFAAVELTLMSSTTESSAKASLIKDLREMTCQVLHYHKADFRGLLPG
LTEFTVKLNLSLLQRDEVKGLRKMELFKQISLGAALYIHPKLKTFLEANPSNGDSNNVLK
KLDSLLKKINVKDGVKMKFFLNLIALCESTGEKLLVFSQYIIPLKTLERLASLTKGWRLG
REMFTITGESSSEEREVSMERFNTSSDARVFFGSIKACGEGISLVGASRVLILDVPLNPS
VTQQAVARAYRPGQTRRVFAYRLVAADSPEEESYETCSRKEMISKMWFESNVGCGVRGDE
FGFREVGVDHSGDAFLETDKMKEDIKCLYTR
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtactgatagctttctacccttctcaagggcgaggaacatgccttggattttg
aggtcgcggagcaagagcattagccagtcagaactcgccaagcgtcctgacccgttcttc
ttaccggatctgcttgatgggtttgaagagactaaatacggttggcttgctgatgatgta
aggaggctctgtgagctcaaaaggaatctcttaaacggttctgtctcatcagtggaagat
gttgtaataactagacgacaacagaagaaggaaaaacctgtcaagttggatgatgtgttg
ttgtctcaagaatcagtcactagcggagattactcaggatctgatgcatgtcctgaaggt
tataacgaggaggattcatccaagactcctcctacagattattatgacaatgaaactcat
gtattcagagatgttgttgctgaagaagaagcagaactctggagacagatggcatttgct
caagaatcatcatccaaggtaacggtggagaatttacaagacaacgatcccaaacaagtg
gaagactgtgagcactccttcatctacaaggatgacgttggagaagtgtgccgtgtctgt
ggactcatcaagacacccatcgaacgcatcatcgaggttgtctactacaacaagccgaag
agatcaaaaagaacttacatacgcgaacaagaagaagacacagaagaagaaacgaggatg
gacttctcttcttctcagaccaacaacaacattcttggagacaagatgttcatccaccca
aggcacgacaaagagatgaaacctcaccaaatcgaaggattcaagttcctatgcaacaac
ctcgcatctaatgagccaggaggttgcatcttagcacacgccccaggatcaggcaagacg
tttctcctcatcagcttcctccaaagcttcatggcaatggatccagacgccaaacccttg
atcgtcctcccaaaggggatcatagagtcgtggaagagagagttcaccaaatgggcggtg
gagaacatccctctctatgatctctacagcgtcaaagccgaatcaagaagacagcagctc
aacgttttgagaacatgggttgagcaaagaagcatcctcttcctcgggtaccaacagttc
gccaagatcatatgcgatgatagttttaacacagatgagtgttcagaagactgcaagagg
atcctactcgagaagccgacgctgcttatcctcgacgaaggtcacacgtcgaggaacgac
gagacgaacatcctcatcgccctagctcgcgtcaagactcgtaggaaagtagtcctcacg
ggtacattgtttcagaacaacgtcaaggaagtgttcaacatcctgaacttagttcgtccc
aggttcttgaagcgtcatagagagattgtttcgcgtatcatgagcaaggcggagatacct
agcggcaaacatttgaaccagagtagtattgagaacactttctttgctgccgtggagctc
acgctgatgagcagcaccacagagtcttcagctaaagcgagtttgataaaggatctacgc
gagatgacgtgtcaggtattgcattatcacaaagcggacttcaggggattgcttccgggg
cttacggagtttactgttaagctcaacttgagtttacttcagagagacgaagtcaaggga
ctgaggaagatggaactgttcaagcagatctctctcggtgctgctttgtatatacacccg
aagcttaaaacattcttggaggcaaacccttcgaacggagatagcaataacgtgctgaag
aagctagatagcttgctgaagaagattaacgttaaagacggcgtgaagatgaagttcttc
ctcaatctaatagctctgtgcgagtcaacgggagagaagctgttggtgttcagccaatac
atcatccctctcaagactctcgagaggctcgcgagcttgacgaagggctggaggttaggg
agagagatgttcacgatcacaggggagtcgagcagcgaggagagagaggtgtccatggag
aggttcaacacctcttctgacgctagagtgttttttggatcgatcaaagcctgtggagaa
gggatatcgctggttggtgcgtcgagggtgctgattctcgacgttcctcttaacccttcg
gtgactcagcaggctgtggcgagagcttataggccggggcagacgaggagggtgtttgcg
tataggcttgtggctgcggattcgccggaggaggagagctatgagacgtgttcgaggaaa
gagatgatttcaaagatgtggtttgagtcgaatgttggatgtggagtgagaggagatgag
tttgggtttagggaagtgggtgttgatcactccggggatgcgtttcttgagacggacaag
atgaaggaagatatcaagtgtttatacactaggtga
DBGET
integrated database retrieval system
