Raphanus sativus (radish): 108856358
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Entry
108856358 CDS
T06014
Name
(RefSeq) peroxisome biogenesis factor 10 isoform X1
KO
K13346
peroxin-10
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108856358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108856358
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
108856358
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-rbx1
zf-RING_UBOX
RING_XB3-XBAT31
Prok-RING_4
U-box
zf-ANAPC11
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
108856358
NCBI-ProteinID:
XP_018485640
UniProt:
A0A6J0NMB4
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Position
5:28474075..28476807
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AA seq
373 aa
AA seq
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MVRLRSGGDSGPGSDEAGSSGIRRFPLAAQPEIMRAAEKDDQYASFIHEACRDAFRHLFG
TRIALAYQKEMKLVGQMLYFVLTTGSGQQTLGEEYCDIIQVAGPYGLSPTPARRALFILY
QTAVPYIAERISSRAATQAFTFDEEEEDDSRIQSPRMIHLPSSASVLSRFKDRLQSLWHR
AIRRWPVVLPVARELLQVLLRANLMLFYFEGLYYHISKRASGVRYVFIGKQLNQRPRYQI
LGVFLLIQLCILTAEGLRRSNLSSITNSVQQASVGSYQTSGGRGLPVLNEEGNLITPEAE
KGNWSPSDATSTTEAVGKCTLCLSSRQHPTATPCGHVFCWSCIMEWCNEKQECPLCRTPN
THSSLVCLYNSDF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggcttcggagtgggggggattcgggcccgggctcggatgaagcaggttcaagt
ggaatccggcgattcccgctcgcagctcagccggagattatgagagccgctgagaaagac
gatcaatacgcttctttcatccacgaagcctgccgcgacgccttccgacaccttttcggt
accagaattgctcttgcttaccaaaaagagatgaaacttgttgggcaaatgctttacttt
gttctaactactggttcaggccaacaaactttaggagaggagtattgtgacattattcag
gttgcaggaccttatgggctgtctcctacaccagctcgacgtgctttgttcatactctat
cagactgctgttccatatatcgccgagaggattagctcaagagctgccacacaagcgttt
acctttgatgaggaagaggaggatgatagtcgtatccagtcaccaagaatgattcatctt
ccctcttcagcttctgtattatctaggtttaaagatagacttcagagtttgtggcaccga
gctattcgaagatggcctgtggttctccctgttgcccgtgaactcttacaagtgcttctc
cgtgccaatttgatgctcttctactttgaaggtctatattatcatatatccaaacgtgcc
tctggggttcgttatgtattcataggaaagcaattgaatcagagacctagataccaaatt
ctcggggttttccttctaatccaattgtgcatccttactgctgaaggcttgcgtcggagt
aatttgtcatctatcacaaactcagttcagcaggcctctgtaggatcttatcaaacctca
ggagggagagggttgcctgttttaaacgaagagggaaatttgattactccagaagctgaa
aagggaaactggtctccctccgatgcaacttcaactacggaggcggtaggaaaatgcact
ctctgcttaagcagccgtcagcacccgacggccactccttgtggtcatgtgttttgttgg
agctgcattatggaatggtgcaatgagaagcaagaatgcccactttgtcgaacacccaac
acccactcaagtttagtttgtttgtacaactctgatttttga
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