Raphanus sativus (radish): 108856420
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Entry
108856420 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase RSL1
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108856420
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108856420
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108856420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
zf-C3HC4
zf-RING_5
zf-RING_2
zf-C3HC4_2
Rcat_RNF216
Motif
Other DBs
NCBI-GeneID:
108856420
NCBI-ProteinID:
XP_018485710
UniProt:
A0A6J0NMI3
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All DBs
Position
5:28455890..28457109
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AA seq
325 aa
AA seq
DB search
MATPSVTPPVFDLNNLPIDIDQEDNDCYIFSVPLSSRGSTKREAISVESYDRDRSLRIKS
EPPIFIDLDQYNNDHDDDDLRILSFPPPPPHTFLEKGQSSNSNKNPRRRRPLTFFDCEIC
VESKPTVESFRISGCSHSYCSDCVSKYIAAKLQDNLLSIGCPVSGCSGRLEPDQCRLILP
REVFDRWGDALCEAVVMRSKRFYCPYKDCSALVFLDEGEDGGSSMKESECPHCNRMVCAA
CGTQWHPEITCEEFQKLAESERGRDDILLKKMAESHKWARCPACKFYIEKSQGCLYMKCR
CGLAFCYNCGTPSRDHSHYCYSCKR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcaactccatccgtcactccacctgtcttcgatctcaataaccttcccatagacata
gaccaagaagacaacgactgttacatcttctccgtccctctctcctcccgcggttccaca
aaacgcgaagccatctccgtcgagagttacgaccgtgatcgtagcctcagaatcaaatcc
gaaccgccaatcttcatagatctcgatcagtacaacaacgaccatgatgatgatgatctc
agaatcctatctttccctcctccaccacctcacacatttctagaaaaaggtcagtcctca
aatagcaacaagaatccccgccggagacgacccttgaccttcttcgactgcgagatttgc
gtcgaatcaaaaccaacggtcgagtcgtttcgaatcagcggatgctctcactcctactgc
agcgattgcgtctctaaatacatcgccgctaagttacaagacaacctgctctccatcggc
tgtcctgtctctggctgttcagggcggctcgagccggaccagtgtcgtctcatcctcccg
cgagaggttttcgaccggtggggagacgctctctgcgaggcggtggtgatgcgttccaag
aggttctactgtccttacaaggactgctctgctctggttttcttggacgagggcgaagat
ggcgggagtagtatgaaggagtccgagtgtcctcactgtaataggatggtgtgtgcggcg
tgtgggacgcagtggcatcccgagataacctgcgaggagtttcagaagctggctgagagc
gaaagaggaagagatgacattttgctgaagaaaatggcagagtctcacaaatgggcgaga
tgtcctgcttgcaaattctacattgaaaagtctcagggttgcttatacatgaagtgcagg
tgtggattggctttttgctacaactgtggaacaccatctagggaccattctcattattgt
tatagttgcaagcgttga
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