KEGG   Raphanus sativus (radish): 108856446
Entry
108856446         CDS       T06014                                 
Name
(RefSeq) exonuclease 1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    108856446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsz03032]
    108856446
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108856446
DNA replication proteins [BR:rsz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    108856446
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     108856446
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 5_3_exonuc Methyltransf_14 MIT TPR_1 Dark_WHD TPR_8
Other DBs
NCBI-GeneID: 108856446
NCBI-ProteinID: XP_056842518
UniProt: A0A9W3BTN0
LinkDB
Position
5:16900673..16904437
AA seq 712 aa
MGIQGLLPLLKSIMVPIHIHDLEGCTVAVDTYSWLHKGALSCSRDLCKGLPTTRHIQYCM
HRVNLLRHHGVKPLLVFDGGPLPMKLEQENKRARSRKENLARALEHEANGNSSAAYESYQ
KAVDISPSIAHDLIQVLRQENVDYVVAPYEADAQMTFLAITNQVDAIITEDSDLIPFGCP
RIIFKMDKFGHGVEFQASNLPKNKELSLSGFSSQMLLEMCILSGCDYLQSLPGMGLKRAH
TLITKFKTYDRVIKHLKYSTVSVPSLYEESFKKAMLTFKHQRVYDPKSEDVVHLCDISED
IGEDSDFVGPSMPQHIAKGIALGQLDPFTQLPFQAEGVTPKLAADAISRPRSFKPENLKK
KLELPVQKNLLTKYFCFATLEAKRKFKAPRISPLSLTPTEESPSTPEDNSTDVDAPSSQT
TNESPVYSLGENTGKVAEKRESPDYDAVERNHKDLEQKVEWPKTKTDGLKVVVRSKYFKQ
KQDHKSLKQSIPCLNDCSMISQRKTVNSEINKSSEESEDRALATISRERIYNDQEASVST
VNEVAERRTMIHQIDNEEQSPSVEILSTFSTPENVTPLNSIGTNSFCGAATGKRKLEPDE
YLHKENMNSKHMRIDETDPSNAETSFENNDVEKFGSNISHIGQYSAIAEKSVERFVSAIS
SFRYSGPGSRASGLRAPLKDIRNTCPSKGLSPKLDFSKFGYSSSSATKSRRL
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgggtattcaagggcttttgccattgctgaaatcgattatggttccgatacatatccac
gacctcgagggttgtacagtcgccgtcgatacgtattcatggctacacaaaggcgctctc
tcttgcagccgcgacctctgcaagggtttacccaccaccaggcatattcaatactgtatg
catagagtgaatttactccgccatcatggagtgaagcctcttcttgtcttcgatggaggt
ccgcttcctatgaaacttgaacaagagaacaaacgtgctaggtccagaaaggaaaatctt
gcacgtgcacttgagcatgaagctaacggaaactcctccgctgcttatgagtcctatcaa
aaggctgttgacatttcaccttctattgcacatgacttgatacaggttctgaggcaggag
aatgtcgactacgttgttgctccttacgaggctgatgcccagatgacatttttggctatt
actaaccaagttgatgccattatcactgaggattctgatcttattccttttggctgccct
agaatcatctttaaaatggacaagtttggtcacggtgttgagtttcaagcctccaacctg
ccaaaaaataaagagctcagcctttctggattttcaagccagatgcttcttgagatgtgc
atattgagtggatgtgattatttgcagtcacttccaggaatgggactcaaaagagctcat
acgctcattacaaagttcaaaacttatgacagggtaatcaagcacttaaagtacagcaca
gtttcagttccttctctatatgaagagtcattcaagaaagctatgctgaccttcaagcat
caacgggtctatgaccccaaatctgaagatgttgtacacttgtgtgacatttctgaagac
attggcgaagattcagactttgtaggcccatccatgccacaacatatcgctaagggtata
gctctgggccagcttgatccattcactcagttgcctttccaggctgagggtgtcactcct
aagttggctgctgatgctatttcccgccccagaagtttcaaacctgaaaatctgaagaaa
aagcttgagttgcctgtccagaaaaaccttctcaccaaatatttctgctttgccacactt
gaggcaaaaagaaaattcaaggctccgaggatatcaccattgtctctgaccccaacagag
gagtctccaagcactcctgaagataattcaacagatgtggatgctccttcgagtcagaca
acaaatgaatccccggtttacagcttgggtgagaatactggcaaagttgcagagaaaaga
gagtcacctgactatgatgcagtggaaaggaatcacaaggaccttgaacagaaagtggag
tggccgaagacgaagacggatggtttgaaggttgttgtaagaagcaagtatttcaagcag
aagcaggatcacaaaagtcttaaacaatctatcccatgtctcaatgattgctctatgatc
agtcagagaaagactgttaattctgagataaacaagtcaagcgaagagagtgaagacaga
gctttagcaacaatttcacgtgagcgtatctacaacgatcaagaagcgagtgtatctacc
gtgaacgaggtggctgagagaagaacaatgatccatcagatcgacaacgaagaacagagc
ccatctgttgagatcctttccacctttagtactccggagaatgttacacctctcaactcc
attggtactaatagtttttgtggagctgcaacagggaaaaggaagcttgagccagatgaa
taccttcataaggaaaatatgaactccaagcacatgcgcatagacgaaactgatcctagt
aatgcagaaacatcatttgaaaacaacgatgttgagaagttcggatccaacatatcacac
atagggcagtactcggcaatagcagagaaatcggtggaaagatttgtctcagctatatca
tcttttagatattctggtcctggctctcgtgctagtggtctgcgtgcacctctcaaagat
atccgcaacacttgtccgtccaaagggttatctcctaaactggacttcagcaagtttggt
tattcatcaagcagcgcaacaaagtcaaggcgattgtga

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