Raphanus sativus (radish): 108856479
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Entry
108856479 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108856479
KO
K20224
importin-9
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108856479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108856479
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108856479
Pre-60S particles
108856479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_IPO9_c
IBN_N
Xpo1
MMS19_C
Motif
Other DBs
NCBI-GeneID:
108856479
NCBI-ProteinID:
XP_056841676
UniProt:
A0A9W3BR72
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All DBs
Position
5:14802285..14809015
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AA seq
1004 aa
AA seq
DB search
MVVDQDQQWLLGCLTASLDPNQNVRSFAETSLNQASLQPVTVYLAAVLLKQFIKKHWREN
EEDFEYPLVSNEEKALIRGLLMGSLDDSHRKICTAISMDISSIATYDWPEDWPELLPFLL
KLISDQNNINGVHGALRCLALLSGDLDDKDVPTLVPVLFPCLHAVVSSPQSYDKYMRGKA
LSIFYSCISVLGAMSGVYKTETTSLVTPLLKVWMNQFSLILEHPVQPDDPDDWSLRMEVL
KCLNQFVQNFPFLMDSELIAIMRPLWHTFESSLQVYLQASIEGAEDSYDGRYDSDGEEKS
LDTFVIQLFEFLSTIVSSRRLAKVIAGNVREMVFQTVAFMQVTEQQVHTWSMDVNQFVAD
EDESSFSCRISGILLLEEVVNTFGREGINAVVDAAGKRFHESQNEKIAGSPSWWRIREAA
LFALASLADQLVDTEDLGTDPANLAKFVEQLIMEDTGTGYHECPFLYARIFTAVAKFSSE
INPGILEHFLNAAVRAINMDVPPPVKVGACRALLQLLPDMNRSVILPQIMNLFSSLTDLL
HQASDETLILVLETLQQAIKAGHEASASIESIISPVILNVWVAHVSDPFISIDTIDVLEA
IKNSPGCLHPLTSRILPFIGPALNKPHQQSEGLVSGSLDLLTMLLKGAPGDIVKTAYEFC
FDAVIRIILHSEDNSELQNGTECLAAFISSGGQELLSWSGDPGFTMRSLLDAASRLLNPD
LECSGSLFAGKYILQLILHLPSEMAPHVQDLVAALVRRMQSAEISGFRSSLLLIFARLVH
MSFPNVDQFINLLVSVPADGHENSFAYVITEWTKQQGEIQGAYQIKVTCSALALLLSTRH
SEFAKVNVPGNQIQSNSGITTRSKAKSAPEQWTIIPLPMKILALLADTLIEIQEQVLGCE
DEDSEWEEVHEGNAEAEKELLRASQSSKPSYDQLEAMARTFENQDDGDGDDDLHAIDPLN
EINLASYLADFLSKFSSGDRPLFDNLCQGLTHAQRNVIQTVLKR
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggaccaagatcagcaatggcttctcggctgcttgacggcgagtctcgaccct
aaccagaacgttcgttctttcgctgagacctcactcaatcaagcctctcttcaaccagtt
actgtttacttagctgcggtcctgttaaagcagttcattaagaagcattggcgagagaac
gaggaggattttgaatatcctcttgtgtccaatgaggaaaaggctcttattcgaggacta
cttatgggctcgcttgatgactctcatcgaaaaatctgtacggctattagtatggacata
tcgtctattgccacttatgattggccagaagactggcctgagcttttaccctttctcttg
aagttgattagcgatcagaacaacatcaatggagttcatggagctttgagatgtttggct
cttctctctggtgacttggatgacaaagatgtgcctacactggtacctgtgttgtttcct
tgcttgcacgctgtcgtatcctctcctcagagctatgacaagtatatgcgaggaaaagcc
ctttctattttttattcatgtatatctgttcttggagcaatgagtggtgtatacaagaca
gaaactacttccttggtgactcctctactaaaggtttggatgaatcagttttcacttata
ctggagcatcctgtgcaacctgacgatcccgatgattggagtttaagaatggaggtattg
aagtgcttgaaccagtttgtacaaaatttcccatttctgatggacagtgaattgatagct
attatgaggccattgtggcacacatttgagtcatctctacaagtctatcttcaagcgtca
attgaaggtgcggaagattcatatgatggaagatatgattcagatggtgaagaaaagagt
cttgacacctttgtcatccagctatttgagtttctgtcaaccatcgtcagcagtagaaga
ctagcaaaggtcatcgccggaaatgtcagagaaatggtatttcaaaccgttgctttcatg
caggttacagaacaacaggttcatacgtggtccatggatgtaaaccaattcgtagccgat
gaagatgagagtagcttcagttgtcgtatatcaggtatacttttgctggaggaagttgtc
aatacttttggtagggaagggatcaacgccgttgtagatgctgctggaaagcggtttcat
gagtcccaaaatgaaaagatcgctggttctccgtcctggtggagaataagagaagctgct
ctgtttgctttggcttctcttgctgatcaacttgttgatactgaggacttgggaactgac
cctgctaatttagctaaatttgttgagcaattgataatggaagacactggaactgggtat
catgaatgtcctttcctttatgcccgcatatttacagcagttgctaagttctcttctgag
atcaaccctggaattcttgagcattttctcaatgctgctgttagagctattaacatggac
gtgcctccacctgtaaaagtaggcgcatgtcgggcacttttgcagctcctacctgatatg
aaccgttcagttattcttcctcagatcatgaacttattctcatctctcactgatcttctc
catcaggcttcagatgaaactttgattttggtacttgaaactcttcaacaagcaattaag
gctggccatgaagcatcagcctcaatagagtctattatctctccggtgattcttaatgtg
tgggtggcacatgtctctgatcccttcataagtatcgatacaattgacgtcttggaggcg
ataaagaattcgcctggctgtctgcacccactgacatcaaggattttaccattcatcgga
ccagctttaaataagccacatcagcaatccgaaggactagtgagtgggtccttggatctt
ttaaccatgcttcttaagggtgccccaggtgatatagtgaaaactgcatatgaattttgc
tttgatgctgtcattcgtatcatactccacagtgaggacaatagtgaattacagaatgga
acggaatgtctggcagcttttatatctagtggaggacaagaattactctcttggagtggt
gatcccggctttaccatgagaagtttgcttgatgcagcttctaggcttctcaaccctgat
ctggaatgttctggatctctatttgctgggaagtacattctccagcttatcttgcatctt
ccgtcagagatggcaccccatgtccaggatctggttgccgctcttgtaagacggatgcag
tctgctgaaatttcgggtttcagaagctccttgctgttgatttttgccagattggtccat
atgagttttccaaacgtggatcaatttatcaatctacttgttagcgtacccgctgatggc
catgaaaattcatttgcctatgttataacagaatggactaaacaacaaggggagatacag
ggggcatatcaaatcaaagtcacatgttcagctctggctttactactgtcaactagacat
tctgaattcgcgaaggtcaatgtcccagggaatcagattcagtccaatagtggcataacc
acgcgctcaaaagctaaatctgctccggaacaatggaccattatccctttacccatgaag
atactggcattactagctgatacgttgatcgaaattcaagagcaagttttgggttgtgaa
gacgaggatagcgaatgggaagaagtccacgaaggaaatgctgaagctgagaaagagttg
ctacgtgcctctcaatcaagcaaaccctcatatgaccaacttgaagcaatggctcgaact
tttgagaaccaagatgatggggatggtgatgatgacttgcatgccatcgacccccttaat
gagattaatctggcaagttatctggctgattttctgtcgaagttttcgagtggagaccga
cctttgtttgataatctttgccaggggttaacacatgcgcaaagaaacgtgatccagacg
gtactgaaacgctag
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