Raphanus sativus (radish): 108856533
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Entry
108856533 CDS
T06014
Name
(RefSeq) tRNase Z TRZ2, chloroplastic
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108856533
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
108856533
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
108856533
Prokaryotic type
108856533
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
108856533
NCBI-ProteinID:
XP_018485861
UniProt:
A0A6J0NP01
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Position
5:31041449..31043258
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AA seq
355 aa
AA seq
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MQLSVPISPSNFFPFPNRHVPPPIHLLPAPQHTHHHHRAGFSTPPVRVSGYFSSISRAIE
EEEEYRKARAAVNRKGVELDGYAVEGISVGGQETCVIVPELKCVFDIGRCPSRAIQQKFL
FITHAHLDHIGGLPMYVASRGLYNLEPPKIFVPPSIKEDVEKLLDIHRSMGQVDLNVELI
PLHVGETYELRNDIVVRPFATNHVIPSQGYVIYSVRNKLKKQYGHLKGKQIEKIKKSGEQ
ITDMILSPEIAFTGDTTAEYMLDPRNADALRAKVLITEATFLDESFSNEHAQSLGHTHIS
QIIENAKWIRSKTVLLTHFSSRYNIEEIREAVLKLQSKVSAKVVPLTEGFRSRYS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcagctttcggttccaatttcaccttccaacttcttccctttccccaatcgacacgtc
cctcccccgattcacctcctccccgcgccgcagcacacgcatcatcaccaccgcgccggt
ttctcgactccacccgtcagagtctccggctacttctcctccataagccgagcgatcgag
gaggaggaagagtaccgcaaggcgcgcgccgccgttaaccgcaaaggcgtcgagctggac
ggttacgccgtggagggaatctccgtgggaggccaagagacctgcgtcatcgtccctgag
ctcaaatgcgtcttcgatatcgggaggtgtccttcgcgcgccatccagcagaagttcctt
ttcatcactcacgctcatctcgatcacatcggaggtctaccgatgtatgtagcgagccgt
gggttatacaatctagagccacctaaaatattcgtgccaccgtccattaaagaagatgtt
gagaaactccttgacattcacaggtctatgggtcaagttgacctcaacgttgaactcatt
ccactccacgttggtgaaacatatgagttacggaatgacattgtcgttagaccttttgca
actaaccacgtcataccaagccagggttatgttatctactcggtcaggaacaagttgaag
aagcagtatggtcaccttaaaggcaaacaaatcgaaaagattaaaaaatctggcgaacag
attacagacatgatattatcccctgagatagctttcactggagatacaactgctgagtat
atgcttgaccctcgtaacgctgatgctttgagggctaaagttcttataaccgaggctacc
ttcttggatgaaagttttagtaatgagcatgcgcagtcactcggtcacactcatatatct
cagataattgagaatgcaaaatggatccggagcaaaactgtgttgctaacgcatttctca
tcacgttacaatatagaggaaattcgcgaagctgtgctcaagttgcaatcaaaagtgtcc
gcaaaagtcgttcctcttacagaaggattcaggtcaaggtattcttga
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