Raphanus sativus (radish): 108856645
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Entry
108856645 CDS
T06014
Name
(RefSeq) lysine--tRNA ligase, chloroplastic/mitochondrial
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108856645
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108856645
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108856645
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
108856645
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108856645
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108856645
Prokaryotic type
Other AARSs
108856645
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Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Imm5
Motif
Other DBs
NCBI-GeneID:
108856645
NCBI-ProteinID:
XP_018485996
UniProt:
A0A6J0NPD6
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Position
5:complement(5066098..5069619)
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AA seq
589 aa
AA seq
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MEALKVWSLTASPLRQLLRLSSSSSSAAIYGRRSHHSSLMLRCASAASSSSSNAATAETP
KPSGRNRRAASSSNSTSDREAIRSIRLKKVEELRGQGVEPYAYKWEKSHSANQLQEIYKH
LENGEESSNESDRVSIAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLSDEQFEQLKA
FIDIGDILGASGSMKRTEKGELSICVSSFSILTKSLLPLPDKYHGLTDIDKRYRQRYVDM
IANPEVADVFRKRAKIVSEIRKTVESSGYLEVETPVLQGAAGGAEARPFVTYHNSLGRDL
YLRIATELHLKRMLVGGFEKVYEIGRIFRNEGLSTRHNPEFTTIEMYEAFSDYQNMMDMA
ELIVTGCAMAVNGKLTLDYQGTEICLERPWRRETMHNLVKEATGIDFNELGGDLGNAKDT
VLLALQDVLEHKDKSGIGACSSLGHLLNEVFELVVEPKLVQPTFVLDYPIEISPLAKPHR
GNAGLTERFELFICGREMANAFSELTDPVDQRRRLEEQVRQHNAKRADDDDDDDDSYEVT
LDEDFLTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKVQQ
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggaggcactgaaagtatggagtctaacggcgtctccgctgagacaattactccgtcta
tcttcttcttcttcttctgcagcaatatatggaagaagatcccaccactcatcactaatg
ctccgatgtgcctccgccgcttcttcttcttcctcaaatgccgccacggctgaaactccc
aaaccttccggccgaaacagaagggcagcttcgtcttccaattccacctccgatcgcgag
gctatccgctccattcgtcttaaaaaggttgaagaactgagaggtcaaggtgttgagcct
tacgcatacaagtgggagaaaagccacagtgcaaatcaactccaagagatatacaaacat
ctagagaatggtgaagagtcaagcaatgagagtgatcgtgtttctatagcagggagggtc
gttgctcgtagagcgtttgggaagcttgcgttcttgactttaagggatgactctggaacc
attcagctttactgtgagaaggaaaggctttcagatgagcagtttgaacagctcaaggca
ttcatagatattggtgatattttaggtgctagtggctcaatgaagaggactgagaaaggg
gagctttctatatgtgtgagttctttttcaatcctcacgaagtctctccttccactgcca
gacaagtatcatggtctaactgatattgataaacgttaccgccagcggtatgtggatatg
attgctaatcctgaagtggctgatgtgttccgcaaaagagcaaaaatagtttcagagata
cgcaagacagttgagtcttctggatatttggaggttgaaactccagttcttcagggagca
gcaggtggagccgaagctagaccctttgtaacgtatcataactcacttggaagggatctc
tacctgaggattgcaactgagcttcacttgaaaagaatgctggttggagggtttgagaaa
gtgtatgaaattggtcgtatatttagaaacgaaggcctttcaacacgtcacaatcctgaa
ttcacaaccatcgagatgtatgaagctttttcggactaccaaaacatgatggacatggca
gaactaatcgtcactggatgtgcaatggcagttaatgggaagctaacacttgattaccag
ggaacagagatctgcctcgagcggccttggaggagagaaaccatgcataacctcgttaaa
gaggcaacaggaatcgatttcaatgagctagggggagatcttggaaatgctaaagacaca
gttctgctggcacttcaagacgtgcttgagcacaaggacaaatctggaatcggagcttgc
tcttctctcggccatcttcttaacgaggtttttgaacttgttgtagagccaaagcttgtg
cagccaacttttgtattggactacccaatcgagatatctcccttggccaagccacaccgc
ggtaatgcaggtttgactgaaagatttgagctgttcatctgtggccgtgaaatggcaaac
gcattctctgaattgactgatcctgtggaccagaggaggcggttggaagagcaagtaagg
cagcataacgcaaagcgagcagatgatgatgatgatgatgacgattcatatgaagtgaca
ctagacgaagactttctcactgccctggaatacggaatgcctcctgcctctggaatgggg
cttggtattgacaggctggtgatgctgttgacaaactctgcgagtataagagacgtcatt
gcgtttcctgttctgaaagttcagcagtaa
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