Raphanus sativus (radish): 108856696
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Entry
108856696 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108856696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108856696
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108856696
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108856696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_6
zf-RING_UBOX
zf-Di19
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
108856696
NCBI-ProteinID:
XP_018486062
UniProt:
A0A6J0NMT9
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All DBs
Position
5:26473694..26476480
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AA seq
308 aa
AA seq
DB search
MAPGGSALKEVLESTSTGMDYEVKMAKVESNNSNNNKPTKSGSGKYGMHSNNGVYELLEC
PVCTNLMYPPIHQCPNGHTLCSNCKARVQNTCPTCRYELGNIRCLALEKVAESLEVPCRY
QSLGCHDIFPYYSKLKHEQHCRFRPYACPYAGSECSVTGDITTLVVHLKDDHKVDMHDGC
TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAK
KFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRV
TGRIWKEE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggaggcagtgctttgaaagaagtccttgaatccacttcaacgggaatggac
tacgaggtcaaaatggcgaaagtggaatctaataatagtaataataacaaacctacaaag
tcagggagtgggaagtacgggatgcattcgaacaatggtgtttacgagcttcttgaatgt
ccagtgtgcacaaatctaatgtaccctccaattcatcagtgtccgaacggccacacctta
tgttcaaactgcaaagcgagagtgcagaacacttgtcctacgtgtcgctacgagcttggc
aacataagatgcttagctctcgagaaagttgcggagtccttggaagttccgtgccggtac
cagagtttggggtgtcatgacattttcccttactacagcaagcttaagcacgagcagcac
tgcaggtttaggccttacgcttgcccttatgctggctctgagtgctcggttacgggtgat
atcaccacgctggttgttcatctgaaagatgaccataaagtggatatgcatgacggatgc
actttcaaccaccgttatgttaagtcaaatccacatgaagtcgagaatgctacatggatg
cttacggtgttcaactgctttgggagacagttctgtttacactttgaagcgttccagcta
gggatggctccagtgtacatggcatttcttcgtttcatgggagatgaaaacgaggcaaag
aagttcagttacagcttggaagtaggagctcatggacgtaaactaacatggcaagggatc
cctagaagcatccgtgacagccacaggaaagtccgggacagtcaagacggtctcatcatc
ccaagaaaccttgcactctacttctctggaggtgataggcaagaactcaagttgagagtg
accggtcgaatctggaaagaagagtaa
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