Raphanus sativus (radish): 108856710
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Entry
108856710 CDS
T06014
Name
(RefSeq) probable sphingolipid transporter spinster homolog 1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108856710
Transporters [BR:
rsz02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
108856710
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
OATP
Sugar_tr
MFS_4
MFS_3
PTR2
Motif
Other DBs
NCBI-GeneID:
108856710
NCBI-ProteinID:
XP_018486078
UniProt:
A0A6J0NQW5
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Position
5:32473329..32476095
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AA seq
493 aa
AA seq
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MTKYGEQRDSPAIAASTVTAPKRFLTPGRFVTILCIVNLINYVDRGVIASNGVNGSSRTC
DSKGLCSAGTGIQGEFGLSNFQDGLLSSAFMVGLLVASPIFAALSKRFTPFKLIGVGLTV
WTLAAVGCGFSYNFWMIAVFRMFVGVGEASFISLAAPYIDDSAPAARKNLWLGLFYMCIP
AGVALGYVFGGYVGNHLGWRWAFYIEAIAMAFFVVLSFCIKPPQLKGFAAKESKKPSSSI
ETVALTHAEAKAVTPKPKTQNLVVVFGKDMKALFSEKVFIVNVLGYITYNFVIGAYSYWG
PKAGFGIYHMKNADMVFGGLTIICGIIGTLGGSYVLDRINATLPNTFKLLAASTLFGAAF
CFVAFCMKNMYAFIGLFAVGEILIFAPQAPVNFVCLHCVRPNLRPLSMASSTVLIHILGD
VPSSPLYGKMQDRLKNWRTSTLIITSILFLAAIIWGIGIFMNSVDRSNEKSEDEIEEEEK
LETKADNNNSVPV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatatggtgagcagagagattctccggctatagcagcttcgacggtcaccgcc
ccaaaacgatttttgactcctggaagattcgtgacgatcttgtgtatagtgaacctgatc
aattacgtggatcgaggagtgattgcgagtaatggtgttaacggaagctcgaggacttgt
gattccaaaggcctctgctctgctggcactggcattcaaggagagtttgggttaagcaac
tttcaagatggtcttttgtcttctgcctttatggttggtcttcttgttgcttctcccatc
ttcgctgccctctccaaaaggttcacgccttttaaactgattggtgttggactaactgtt
tggactctggctgctgttggttgcggcttctcttacaacttctggatgattgctgttttc
cgaatgtttgttggggttggtgaagcttccttcattagtcttgcagcaccttacatcgat
gatagcgctcctgctgcacggaaaaatctgtggcttggactgttctacatgtgtatacca
gcaggagttgctcttggctacgtgtttggtggatatgttggaaaccatcttggatggcgt
tgggcgttttacattgaggcaatcgcaatggctttctttgttgttttgtccttctgtatc
aaacctccacagctcaaaggttttgctgctaaagaatcgaagaaaccctcttcgtctatt
gaaacggtcgctctcacacatgcggaagctaaagccgtaacccccaaaccaaagactcag
aacctggtagtcgtatttggaaaggacatgaaggctcttttcagcgagaaagtatttata
gtaaacgttcttggatacatcacctacaactttgtgatcggagcttactcgtattgggga
ccaaaagctggttttggtatctaccatatgaaaaacgcagatatggtttttggaggcctt
actatcatctgtgggatcattgggacgttaggcggaagctatgtgcttgatcgcatcaac
gctacacttccaaacaccttcaagttactagcggcatcaactttattcggcgcagccttt
tgtttcgttgctttctgcatgaagaatatgtatgcattcatcggtctgtttgctgtggga
gagattttaatcttcgctccacaggctccggttaactttgtgtgtctgcattgcgttaga
ccaaacttgagaccactatcaatggcatcttcaactgttttgatccatatcttaggagat
gttccttcttctcctctgtatggaaaaatgcaggatcgtctcaaaaactggaggacatca
actcttattattacttcaatcctcttcctcgcagctatcatatggggcattgggatattt
atgaatagtgtggaccgttctaatgaaaagagtgaagatgagatcgaggaggaagagaaa
ttggagaccaaagcagacaacaacaactctgttcccgtctaa
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