Raphanus sativus (radish): 108856806
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Entry
108856806 CDS
T06014
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 5
KO
K18342
OTU domain-containing protein 6 [EC:
3.4.19.12
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108856806
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108856806
Ubiquitin system [BR:
rsz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
108856806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
108856806
NCBI-ProteinID:
XP_018486197
UniProt:
A0A6J0NQ16
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Position
5:complement(28239351..28241207)
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AA seq
333 aa
AA seq
DB search
MADTNASVETTTDASQKQHETVDEMLARHRQEIKQLQNKETELKKAAAKGSKAEQKAKKK
QVEEDISKLSTKLKEKQLKELASQGFSSSSSSSSGTNISKAETNEKKGDIDTLVRAIAGV
SVTAQQEHSKQPSKSVKRREKRAKEEAEREQRIKEEQSNVTSDRMVENQKLEKKLKPMGL
TVSEIKPDGHCLYRAVENQLANLSGGGASPYTYQKLREMAAAYMREHRADFIPFFLTETT
ESESDESAEERFERYCREVESTAAWGGQLELGALTHCLRKHIMVFSGSFPDVEMGKEYKS
SGNDDSLKLSYHRHAFGLGEHYNSVVVVNNITE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaccaatgcatctgtagaaaccaccactgatgcttctcagaagcaacatgaa
acggtggatgagatgcttgctaggcacaggcaagagataaaacaactacagaacaaggag
acggagctgaaaaaggctgctgctaaaggaagcaaagccgagcagaaagctaagaagaag
caagtcgaagaagacatttcgaaactctccaccaagcttaaggagaaacagctcaaagag
ctcgcctcccaaggttttagcagcagcagtagcagcagcagcggcaccaacatctccaag
gccgaaacgaatgagaagaaaggagatatcgacactctagtgagagccatcgctggagtc
tcggtcaccgctcagcaagaacactcgaagcagccgagcaagagcgtgaagaggcgtgag
aaacgagccaaagaagaagcggagagagagcagagaatcaaagaggagcagagcaacgtg
acgagcgatcgtatggtggagaaccagaaactcgagaagaagcttaaaccgatggggcta
accgtcagcgagataaaaccagacgggcattgcctttaccgagcagtggagaaccagctc
gccaacctctcaggcggcggtgcatcaccttacacgtaccagaagctgagagaaatggct
gctgcttacatgagggagcacagagcagacttcatcccgtttttcttaacggagaccacc
gagtctgaatctgatgagtctgcagaggagcggtttgagagatactgcagggaagtggag
tcgacagctgcttggggaggtcagctggagctaggagcgttgacgcattgtttgaggaaa
cacataatggtgttttcaggatcgttccctgatgttgaaatggggaaagagtataaatca
tccggcaatgacgacagcctcaagttatcgtatcacaggcatgcttttgggctcggtgaa
cattataactctgttgttgtcgtcaacaacatcaccgaatga
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