Raphanus sativus (radish): 108856907
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Entry
108856907 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108856907
KO
K19025
AP-5 complex subunit zeta-1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
108856907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108856907
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
108856907
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
108856907
NCBI-ProteinID:
XP_018486310
UniProt:
A0A9W3DRS0
A0A6J0NP77
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All DBs
Position
5:complement(37022506..37025890)
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AA seq
563 aa
AA seq
DB search
MNGQDGDWNYHLRILSNSARDSTDPASDPSVLQSVKKLHGFCKLEKSDDLVARIYPQINK
VFQRSVASVSQSESSGTSKGLLLLAILQFFLDFGDMVLHDADPSLRTFFRSCLSREFSDA
AVAEATCEFLIENKRKLLASFPNLLPQFFPLLLKLIAWNWEKLEKSFLKIFPGLISPGSF
LPLFPSILDLPMLVVALEKVERSSGSGSRVGGSIASIQKSAAPEMLLALMDEAYTGSTIG
DGGDDSESEDNNTIDVADPLFLELLKDENDGLAERHRASPALNAALQAAASGPRSERMKQ
TLKIAPRLLDVYFSVTLRDANDSLICALIPLLMTRNSTMFPDKNFSHEIRRRLLEFVLAA
FQRSPNFIALLKKPIIDRLGEAYDDSAKRELALQLCWAIGEYGGGGESHKEAARELFESL
ELLLYENLSSSRLGLRQESGNASRRTTQSRLLCFVVTAIAKLATYHRELLPRARVALGKV
VRSRISDARVWRRAHDYLGLMNEPGICWSVLGPSRVSEKRFPGTVNWSEGGDKMVAHIPF
HILSEQGGPPFHDFALSDVIPQN
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtcaagacggagactggaattatcatctgaggatcctaagcaatagcgcgcgt
gattccacggatcctgcttctgatccatctgtgctacaatcagtgaagaagctacatggg
ttctgtaaattggagaaatcagacgatctggtggcgagaatttaccctcagatcaataag
gtcttccagcgttctgtagcttcagtgtctcagtctgagtcgtcaggaacctccaaaggc
cttctcttgctagccattcttcagttttttcttgattttggagatatggttctgcacgat
gctgacccgagtttgaggactttcttccgttcgtgtcttagccgtgagttctcggatgct
gctgttgctgaggcaacttgtgagttccttatcgagaacaagagaaaactcttggcgtct
ttccctaacctactccctcagttttttccgttgttgcttaagctcattgcctggaactgg
gagaagttggaaaagtccttcctgaagatatttccaggactgatatcacctggatcgttt
cttcctctgtttccatccattctagacttgccaatgctggttgtggcactagaaaaagtg
gaaaggagctcggggtcagggtcaagggtcggaggtagcattgcttcgatccagaagagt
gcagctccggagatgcttcttgcccttatggatgaagcctatactggttcaaccatcgga
gacggaggggatgactcagagtctgaagataacaatacaatagatgtagctgatcctctg
tttcttgagcttctcaaggacgaaaatgatggtctagctgaaagacaccgagcttctcct
gcattaaacgcagcgctgcaggctgctgcgagtggtcctcggtcagagaggatgaagcag
acacttaagattgctcctcggcttcttgatgtctacttcagtgttaccttgcgagatgct
aatgactctctgatatgtgcactaatccctctactcatgacaaggaactctacaatgttt
ccggataagaatttttctcatgagatccgtaggaggctacttgaattcgtgttggctgca
tttcagagatctccaaacttcattgcgctcttgaaaaaacctataattgataggcttgga
gaagcttatgatgactctgctaagagagagttagctttacagctatgttgggcaatagga
gagtatggtggtgggggagaatcacacaaggaagctgctcgagagctctttgaaagctta
gagttgcttctctatgagaatctctcatcaagccgtctaggtctgaggcaagaatccggg
aatgcttccagaagaacaacacagtcaaggctcttgtgttttgtggtgactgctatcgca
aagctcgcaacttatcaccgtgaactattgccaagagctcgtgttgccttgggaaaggtg
gttaggtctaggatatctgatgcaagggtttggagacgagcacatgattacttgggactg
atgaacgagccagggatctgttggtctgtgttaggaccttcacgtgtttcggaaaaaagg
tttcctggcacggttaactggagcgagggtggggacaaaatggttgcacacattccgttt
cacattctaagtgaacaaggaggtccaccgttccatgactttgctctctctgatgtcatc
ccccaaaactga
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