Raphanus sativus (radish): 108856967
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Entry
108856967 CDS
T06014
Name
(RefSeq) protein-tyrosine-phosphatase IBR5
KO
K04459
dual specificity MAP kinase phosphatase [EC:
3.1.3.16
3.1.3.48
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108856967
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108856967
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108856967
3.1.3.48 protein-tyrosine-phosphatase
108856967
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
MAPK phosphatases
108856967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSPc
Tc-R-P
Init_tRNA_PT
PTP-SAK
Y_phosphatase2
Y_phosphatase3
Y_phosphatase
DUF7803
PTPlike_phytase
RUBY_RBDX
Motif
Other DBs
NCBI-GeneID:
108856967
NCBI-ProteinID:
XP_018486382
UniProt:
A0A6J0NNQ1
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All DBs
Position
5:13545570..13547410
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AA seq
261 aa
AA seq
DB search
MRKRERENPCSLCGHYHKYEEGEVCGICGHRKPDESSDVAAPQVHSGAFPTEILPEFLYL
GSYDNASRSEVLKTQGISRVLNTVPMCQNLYRNSFTYHCLSDDKVLQFDDAIKFLDQCEK
DKARVLVHCMSGKSRSPAVVIAYLMKRKGWRLAESHQWVKQRRPTTDITPEFYQQLEAFE
QTILGSREGMMAAMNINDPPTFGFGFPKANNNSQAPVPVFNNASASSIFSSPASSILPHG
FTFGAAPPKPTTGDDIIMDGS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagagagagcgagagaacccttgttcgctttgtgggcactatcacaagtacgag
gaaggagaggtctgcggaatctgtggccatcgtaagcctgatgaatcctctgatgtcgct
gctccgcaagtccactcgggcgcttttccgacggagatcttgccggagtttctctacctc
ggaagctacgacaacgcctctcgttctgaggttctcaagactcagggaatttctcgagtt
cttaatacggttcctatgtgccagaatctctacaggaactcattcacttaccattgcctc
tctgatgataaagtcttacagttcgatgatgctatcaagttcctagaccaatgtgagaag
gacaaggcacgtgttcttgtgcactgcatgtcagggaaaagcagatcaccagcggttgtt
atagcgtatttgatgaaacgtaaagggtggagactcgctgagagtcatcagtgggttaag
caacggagacccacaacagacataactccagagttctaccaacaactggaggcgtttgag
cagactatacttggatcaagagaagggatgatggcggcgatgaatatcaacgatcctcca
acatttgggtttggtttccctaaggctaataataatagtcaagcgccagtccctgtgttc
aacaatgcttctgcttcttctatattttcgtcccctgcttcaagtatccttcctcacgga
ttcacttttggagcagctccaccgaagccaacaactggcgatgatattatcatggatggc
tcttaa
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