Raphanus sativus (radish): 108856977
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Entry
108856977 CDS
T06014
Name
(RefSeq) isopentenyl-diphosphate Delta-isomerase II, chloroplastic
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00900
Terpenoid backbone biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Module
rsz_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
rsz_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
rsz_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108856977
Enzymes [BR:
rsz01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
108856977
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-GeneID:
108856977
NCBI-ProteinID:
XP_018486396
UniProt:
A0A6J0NQG4
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All DBs
Position
5:871536..873431
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AA seq
291 aa
AA seq
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MSASSCLFNLPLIRFRSLSLPPSSSRFLRLPPPSSSLRSFSVPISPRKFRAFSGTTAMAT
DAKDAGMDAVQRRLMFEDECILVDEADRVVGHDSKYNCHLMENIEAKNLLHRAFSVFLFN
SNYELLLQQRSKAKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGIVA
EDVPVDEFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVEPNPDEVAEIKYVSREGLK
ELVKKADAGEEGLKLSPWFRLVVDNFLMKWWDHVEKGTLDEAVDMKTIHKL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttcttcttgtttatttaatctccctttgattcgcttcagatctctctccctt
cctccatcctcttcccggtttctccgtcttcctcctccatcatcatcgctccgatccttt
tcggttccaatatcgccgagaaagtttcgagctttctccggtaccaccgcaatggcaaca
gatgctaaagatgctggaatggatgctgtccagagacgcctcatgtttgaggacgaatgc
attcttgttgacgaagctgatcgcgttgtagggcacgacagcaaatataattgtcatctg
atggaaaatattgaagctaagaatttgcttcacagggccttcagtgtatttttattcaac
tccaactatgagttgcttctccagcaaaggtcgaaagcaaaggtgaccttccctctagtg
tggacaaacacttgttgcagccatcctctttaccgtgaatctgagcttatcgaggaaaat
gcactcggtgtgaggaatgctgcacagagaaagcttcttgacgagctcggtattgtagct
gaagatgtaccagtggatgagttcactcccttggggcgtatgctttacaaggctccttct
gatggcaaatggggagagcacgaactggactacttgctgttcattgtgagggatgtgaag
gtggaaccaaaccctgacgaagtggcggagatcaagtatgtgagcagggaagggctgaag
gagctggtgaagaaagcagatgcaggggaggaaggtttgaagttgtcaccatggttcaga
ttggtggtggacaatttcttgatgaagtggtgggatcatgttgagaaaggaactcttgat
gaagctgtagacatgaaaaccatccacaaactctga
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