Raphanus sativus (radish): 108856980
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Entry
108856980 CDS
T06014
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108856980
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108856980
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108856980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf_RING_Vps8
zf-C3HC4_3
zf-ANAPC11
zf-RING_Vps41
Prok-RING_1
zf-RING_16
zf_RING_Vps8_fungal
zf-Nse
zf-C3HC4_4
FANCL_C
zf-RING_4
RINGv
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
108856980
NCBI-ProteinID:
XP_018486400
UniProt:
A0A6J0NPG5
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All DBs
Position
8:complement(12286450..12287985)
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AA seq
159 aa
AA seq
DB search
MGLSSLPGPSEGMLCVLLVNTALSISIFKGIVRSVLQLVGIRLSPSSVAPAASSENQTSE
TFDFRVCQPESFLEEFRNMTPTMKFESLCKCKKQADNECSVCLSKFEEDSEINKLKCGHL
FHKTCLEKWIDYWNITCPLCRTPLVVVAPDDQLVSSNVW
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgggtctatcaagccttcctggtccatcagaaggaatgctatgcgtgttattagtcaac
acagccttatcaatctccatcttcaaaggcatcgtcagatcagtgcttcagctagtagga
atccgtctctctccttcttcagtagcgccggccgcatcttcagagaatcagacatcagag
acttttgatttccgggtctgccagcctgagagtttccttgaggaattcaggaacatgacc
cccacaatgaagtttgagagcttgtgcaagtgcaagaaacaggcggacaacgagtgttct
gtatgcctgtcgaaattcgaagaggattcagagatcaacaagctaaaatgtggccacttg
tttcacaaaacatgcttggagaaatggatagactactggaacatcacttgcccactctgt
aggactcctcttgttgttgtcgcaccagacgaccagctggtttcctctaatgtttggtga
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