Raphanus sativus (radish): 108856996
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Entry
108856996 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-8
KO
K10357
myosin V
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108856996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108856996
04131 Membrane trafficking [BR:
rsz04131
]
108856996
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108856996
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rsz04812
]
108856996
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108856996
mRNA cycle factors
P-body specific factors
108856996
Membrane trafficking [BR:
rsz04131
]
Others
Actin-binding proteins
Myosins
108856996
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108856996
Cytoskeleton proteins [BR:
rsz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108856996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
TSC22
AAA_22
GAS
Flp1_like
CbiA
Motif
Other DBs
NCBI-GeneID:
108856996
NCBI-ProteinID:
XP_018486415
UniProt:
A0A6J0NPI1
LinkDB
All DBs
Position
5:20993916..21003493
Genome browser
AA seq
1520 aa
AA seq
DB search
MVATFSPAVGSRVWVEDADEAWLDGEVVEISGEQIKVLCTSGKQVTVNASNIYPKDVEAP
ASGVEDMTRLAYLHEPGVLQNLQSRYDINEIYTYTGSILIAVNPFRRLPHLYSSHMMTQY
KGASLGELSPHPFAVADAAYRQMVNEGVSQSILVSGESGAGKTESTKSLMQYLAYMGGRA
GASEGRSVEQKVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDQSGRISGAAIRTYLL
ERSRVCQLSDPERNYHCFYMLCAAPEEDVKKFKLGEPKTYHYLNQSKCLALESINDAEEY
HATRKAMDVVGINSEEQDAIFRVVASILHLGNIEFGKGKEIDSSVPKDEKSWFHLKTAAE
LLMCDAKSLEDSLCKRIMATRDETITKDLDPEAATLSRDALAKVMYSRLFDWLVEKINSS
IGQDPESKYLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEAI
DWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTYKNHKRFTKPK
LARSDFTICHYAGDVTYQTELFLDKNKDYVIAEHQALLNASTCSFVANLFPPATDDSKQS
KFSSIGTRFKQQLVSLLEILNTTEPHYIRCIKPNNLLKPGIFENKNVLQQLRCGGVMEAI
RISCAGYPTRKHFGEFLNRFSIISPQVLDKNSDEPAGCKKLLDKAGIEGYQIGKTKVFLR
AGQMADLDTKRTEILGRSASIIQRKVRSYLAKKAFMQLRSSATQIQAVCRGYIGRGVYES
MRREAAALKIQRDLRKFLARKAYTDMFSAAVSIQAAMRGMVSRKELSFRRQTKAATIIQN
RCRVFLARLHYRKLRKAAITTQCAWRGKVARKELKTLKMAAKETGALQEAKNKLEKQVEE
LTWRLQLEKRMRTDLEEAKKQENAKYEASLEEIQNKFKETEALLIKERETAKEVSEVLPI
IKEVPVVDQELMEKLTNENETLKGMVSSLETKIDETAKELQETSRISQDRLKQALKAESK
VEKLKTAMQRLEEKISEMEAEKQIMRQTILNTPVQTVSGHPPTVNVKNLENGQRTNVETQ
LNEAEVAGNTGKSTAERLLENVDTLVDCVKGKVEFSNGKPVAAFTIYKCLLHWKCFESEK
TNAFDRLIEMIGSAIEIEDDNAHLAYWLTNTSALLFLLQKSLKTGGAGATASKKPPITTS
LFGRMALSFRSSPNLAAAADAAALAVIRPVEAKYPALLFKQQLAAYVEKIFGMIRDNLKK
ELSALISLCIQAPRVSKGGMQRSGRTPGKDSPAIHWQSIIDGLNSVLAILKENNVPLVLI
QKIHTQTFSFINVQLFNSLLLRKECCTFSNGEFVKAGLAELELWCGQVNEYAGPSWDELK
HIRQAVGFLVIHQKYRVSYDDIVHDLCPILSVQQLYRICTLYWDDCYNTRSVSQEVISSM
RALMTEESNDADSNSFLLDDNSSIPFSVDEISSSMQEKDFASVKPAKELLDIQTLFSCTE
FLGTEKLYQILKTSSSVVLA
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atggttgctaccttcagtcctgcagttgggtcccgtgtgtgggtggaggacgcggatgaa
gcatggctagatggtgaagtcgtagagattagtggtgaacagatcaaagttctctgcact
tcagggaaacaagtcacagttaatgcttcaaatatatacccgaaagatgtggaagctcca
gcatctggggtggaggatatgacaaggctggcttatttacatgagcctggagtccttcag
aatttgcaatcaagatatgatataaatgagatttatacatacacaggaagcatattgatt
gctgttaacccgttcagaagacttccacatctatatagtagccatatgatgactcaatat
aaaggtgcctcccttggtgagctgagtccacatccttttgctgttgcagatgctgcttat
agacagatggttaacgaaggagtaagccaatctatcttggttagtggtgaaagtggggct
ggtaaaactgaaagcacaaagtcgcttatgcaatatcttgcttacatgggagggagagct
ggtgcttctgagggaaggagtgttgagcagaaagttttggagtcgaatcctgttttagag
gcatttggaaatgcaaagactgttaagaacaataactccagtcgatttggtaagttcgtg
gagattcagtttgaccaatcagggaggatatctggagctgctataagaacttatttgctg
gaaaggtcccgtgtttgccagttgtctgaccccgaaagaaactatcattgtttctacatg
ctttgtgctgcacctgaagaagatgttaagaagttcaagcttggtgagccgaagacatac
cactatctcaatcaatccaagtgtcttgcattggagagtataaacgacgctgaggaatat
catgcaacaagaaaggctatggatgtcgttgggatcaattctgaagagcaggatgcaatt
ttccgcgttgtagcttctattttgcatctggggaatattgaatttggtaaaggaaaagag
attgattcatcagtccctaaagatgaaaagtcttggtttcatctgaaaactgccgctgag
cttctcatgtgtgatgcaaagtcacttgaggattctctatgcaaacgtatcatggcaacc
cgtgatgagaccatcacaaaagatctcgatccagaagctgctactctcagcagagatgct
ttggctaaagtcatgtactcaagactgtttgactggctcgttgagaagattaacagttca
attggccaagatcctgaatcgaagtacttgatcggtgttcttgatatttatggattcgag
agtttcaagacaaacagttttgagcaattttgcatcaatttgactaatgagaaacttcaa
cagcactttaatcagcatgtgtttaaaatggagcaagaggagtataagaaggaagcgatc
gactggagctatattgagtttgtggacaatcaagatatcttggacctaatagaaaagaaa
cctggaggtattatagctcttctagatgaagcttgcatgtttcctagatcaacacacgag
acatttgcacagaagctataccagacatacaaaaaccacaaacgctttaccaagccgaaa
ctggctcgcagtgacttcacaatctgtcactatgctggtgatgtcacttatcagacagaa
cttttcctagacaagaacaaggattacgttattgctgagcatcaagcgctgttaaatgct
tctacatgttccttcgttgcaaatctgttcccaccagcaactgacgattccaaacaatca
aaattctcctctatcggtactcgtttcaagcaacaactggtatcactgcttgagattctc
aatacaacggagccacattatatcagatgtataaagcctaataatctattgaagcctgga
atctttgagaacaaaaatgttctccagcaattacgttgtgggggagtcatggaagctatt
cggattagttgtgctggctatcctactaggaagcactttggcgagttcttgaatagattt
agtatcatttctccacaagtgttggacaagaattctgatgaaccagctggttgcaagaaa
cttcttgataaggcaggaattgaaggatatcaaattggtaagacaaaggttttccttagg
gccggacaaatggcagatttggatactaaaagaactgaaatcctgggaagatcagctagt
attatccagagaaaagtacgatcatatcttgccaaaaaagcttttatgcagctacgtagt
tctgctactcagatccaggctgtttgcagaggctatattggtagaggtgtatatgaaagc
atgcgcagggaagctgctgctttgaaaatccagagagacttgcgcaagtttctcgctagg
aaagcttacactgatatgttctctgcagctgtttcaattcaagcggctatgcgtggtatg
gtttcgcgtaaggaactgtctttcagaaggcagactaaagctgcaacaataatccagaac
cggtgccgtgtgttcttggctcggctgcattacagaaaactgaggaaagcagccatcaca
acacagtgtgcgtggagaggaaaggttgcgcgtaaagaactcaaaactcttaagatggct
gctaaagaaacaggagccctccaagaagctaaaaacaagctagagaagcaagtcgaggaa
ctcacatggagattgcagttagagaaacgaatgaggactgacctggaagaggccaagaaa
caagaaaatgcaaagtatgaggcttctctagaggaaatacaaaacaagttcaaagaaacc
gaggcactgcttattaaagagcgtgaaactgccaaggaagtttccgaggtgctccctatt
atcaaggaggttcctgtagttgaccaggaattaatggagaaactcacaaacgaaaatgaa
acgctgaaggggatggtgagttcgctggaaacaaagatagatgaaacagcaaaagaactt
caggagacgagcagaattagccaggatagactaaagcaagctttgaaggcagaatctaaa
gtagagaagttgaagaccgcaatgcaaaggcttgaagagaagatttcagaaatggaagct
gagaaacaaattatgcgtcagacaatcttaaacactcctgtgcaaactgtatcagggcat
cctccaactgtaaatgttaaaaatctggaaaatggccagcgtacaaatgtggaaacccag
ttaaatgaagctgaagtcgctggaaatactgggaaatctactgcagaacgtctacttgag
aatgttgatactctcgttgactgtgtcaagggaaaagtcgaattcagtaatggcaaacct
gttgctgcatttacaatatacaagtgtcttcttcattggaaatgctttgaatctgagaag
actaatgcgtttgatcgtcttattgagatgattggttccgctattgagattgaagatgac
aatgctcatttggcgtattggttgacaaacacatccgcactactatttttactacagaag
agtcttaaaactggtggcgcaggagcaacggcaagcaaaaagccacccatcacaacttcc
ttgtttggaagaatggccttgagcttccgctcgtcaccgaaccttgctgccgcggctgac
gctgccgctcttgcagtgatccgcccagtggaggcaaagtacccggctctacttttcaag
caacagcttgcagcttatgttgagaaaatatttgggatgattagggataacttgaagaaa
gagctctcagctttgatttctctgtgcattcaggcaccgagagtttcaaaaggagggatg
caaagatctggaaggacacctggaaaagactccccagctattcactggcagagcattatt
gatggtctcaattcggttcttgctattttgaaagaaaataatgttcctttggtactcatc
cagaagatacacactcaaactttctcgttcatcaatgtgcaactgtttaacagccttctc
ctgcgtaaagaatgctgtacattcagcaacggagaatttgtaaaagctgggcttgcagag
ctagagttgtggtgcggccaagtcaatgaatatgctgggccatcttgggatgaactaaaa
cacatcagacaagctgttggtttcctggttatccaccagaagtatagagtatcatatgat
gatatagtacatgatctttgcccgatccttagtgtgcaacaactttaccggatatgtaca
ttatactgggatgactgctataacacccggagtgtgtctcaagaggtgatatcgagcatg
cgtgcactcatgacagaggaatcaaacgatgcagacagcaattccttcttgttggatgat
aattccagcattcccttctcagtggacgaaatatcaagttccatgcaggaaaaagacttt
gcgagtgtgaaacctgcaaaagagcttcttgacatccagactttgttttcttgcactgag
tttcttggaactgagaagctctatcagattctaaaaacctcttcctctgttgttttagcc
tga
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integrated database retrieval system
