Raphanus sativus (radish): 108857092
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Entry
108857092 CDS
T06014
Name
(RefSeq) ATP-dependent DNA helicase Q-like 5
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsz03032
]
108857092
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108857092
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108857092
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
108857092
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
108857092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF5382_C
Motif
Other DBs
NCBI-GeneID:
108857092
NCBI-ProteinID:
XP_018486523
UniProt:
A0A6J0NS42
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All DBs
Position
5:15395945..15401163
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AA seq
897 aa
AA seq
DB search
MDSDSDSDGSHISATPPRDPFPPPPPPKQVPRQVPPSSSSGTKPKAHTQRQPGDHSEEAP
VPSSSHPPPPPPSLFTENLPFRICETSNRSKPASFSSFNRLTRASEEIESKSDSQLSEVN
HVLPQLPPPKLVRRKPPNLITDSITSQPVKAPVVFRSGGEGNFVKLNLNGKRGKKFPSKY
KKSASKYRGKRYKKSEAGGEGETWLEEESDLQREEDEASDDGFISSVDDAVLAVKTDASD
ENLTKLLSLVFGYDSFRDGQLQAIKMVLAGSSTMLVLPTGAGKSLCYQIPAVVLPGITLV
VSPLVSLMIDQLKHLPSVVKGGLLSSSQRPEEATETLRKLKEGIIKVLFVSPERLLNVEF
LSMFRMSLSVSLVVVDEAHCVSEWSHNFRPSYMRLKASMLYSALNADCILAMTATATTMT
LQAVMSALEIPSTNLIQKSQLRDNFELSVSLSGANRLKDLLILMESHPYKKIRSIIVYCK
FQYETDMISKYLRDNNITAKGYHSGLPAKDRVRIQESFCSNKIRVVVATVAFGMGLDKGD
VGAVIHFSVPGSLEEYVQEIGRAGRDGRLSYCHLFYDEDTYLKLRSLSHSDGVDEYAVGK
FLTHVFSSDTKQHEKICSIVIESASHKFDMKEEVMQTILTHLELGEVQYLRMLPQVNVCC
TLNFHKSSPNILAARNIIVATILKKSHLKQGLYVFDIPTVASSTGVATTDVLAEIQTLKM
KGEVTYETKDPAFCYTILESPKEISSLSSQLTKWLAEVESCKVRKLDIMSSAAVAAINVS
NTSETSSGAKQTLSLQSRILDYFNGDESCDIPSKTTQNCSFLRADIKVFLQSNRQAKFTP
RAIARIMNGVGSPAFPNSIWSKTHFWGRYMSVDFRVIMEAAQTELMNFVDRNAALAT
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggactcagattcagactccgacggatctcatatctccgccactcctccccgagacccc
ttccctccgccgccgccgccaaaacaggttcctcggcaggtacctccgtcatcttcctct
ggcacgaagcccaaagcacatacacagcggcagcctggggatcactcagaagaagctcca
gtaccatcatcttcccatcctcctcctcctccaccttcattattcaccgaaaatctccct
ttccggatctgcgaaacctcaaatcgatccaaacccgcttccttttcgtccttcaataga
ctcacaagagcttctgaagaaatcgaatcaaaatcggattcccagttgagtgaagtcaat
catgtcctcccacagctccctcctccaaagcttgttagaagaaagcctcccaacctcatc
acggactccataacttctcagccggtgaaagctccggttgtgtttcgtagcggcggcgag
ggtaatttcgtcaaattaaacttgaatggcaagagggggaagaagttccccagcaaatac
aagaagagcgcatcaaaatacagaggaaaaagatacaaaaaatcagaagctggaggcgaa
ggtgaaacttggttggaggaagagtctgatttgcagagagaagaagacgaagcttctgat
gatggatttatcagctcagtagatgacgcggttcttgcagtgaagactgatgcttctgat
gagaatcttacgaagctgttgagtttagtgtttggttacgattcttttcgagatggccag
ttgcaggctatcaagatggttcttgctggtagttcaaccatgcttgtgttgcctactggt
gctggtaagtctctctgctaccagattcctgcagtggttcttcccggtatcacgcttgtt
gtgagccctttggtttcgctgatgattgatcagttgaagcatttgccttccgttgttaag
ggtggtctcttaagctctagccagagacctgaggaagcaacagaaacattgaggaaactt
aaagaaggcataataaaggttctctttgtgtctcccgagagacttctgaacgtagaattt
ttgtcaatgttccgcatgtctttatctgtgtctcttgtcgttgtggatgaggcacattgc
gtatcagaatggtctcataacttccgcccttcatacatgagactcaaggcatcaatgctg
tactctgccctcaacgcagactgcattcttgcaatgactgcaactgctactactatgact
cttcaggctgtcatgtctgcactagagattccgtcaaccaatcttattcaaaagtcgcaa
ctgagagacaattttgagctgtctgtctctttgagcggagctaatagactgaaagatcta
ttgattttgatggagtctcatccatataagaagattcggagcatcattgtgtactgcaaa
tttcagtatgagactgacatgataagcaagtatttacgcgataacaacatcactgcaaag
ggttatcacagtggtcttccagcgaaagatcgtgttcgcatacaagagtcattttgttcc
aataagattagagtggttgttgcaactgtggcattcggcatgggacttgacaaaggagat
gttggagctgtaatccacttcagcgtgccaggcagtttggaagaatacgttcaggaaatt
ggacgagctggtcgtgacgggcggttgtcttattgtcatctcttttatgatgaggacaca
tatctaaagcttcggagtctttcacacagtgatggtgtcgatgaatatgcagttggaaag
tttctcacccatgtgttctcatctgacacgaagcaacatgaaaagatatgctccatagtc
attgaatctgcctctcataaatttgacatgaaggaagaggttatgcaaacgattttgaca
catttggaattgggggaagtgcaatacttacgtatgcttccacaggttaacgtatgttgc
actttgaatttccacaagtcttctccaaatattctggctgcacgaaacatcatagttgca
acaatactgaagaagtctcacttgaagcaagggttatatgtcttcgatataccaaccgtg
gcctctagcacaggtgttgcaacaacagatgtcttggctgagattcaaactctgaagatg
aagggggaagtaacatacgagacgaaagacccagccttttgttacacaatcttagagtct
ccaaaggaaatatcttctttgtccagccaacttaccaagtggctcgcagaggttgaatct
tgcaaagtaaggaaactagatatcatgtctagtgcagccgtggctgctataaatgtctcc
aacacttcagaaactagttcaggtgccaagcaaactctgagcctgcaaagcagaatcttg
gattacttcaatggagacgaaagttgtgacattcctagcaagacgactcaaaattgctcc
ttcctacgagcagacataaaggtgttcttgcagagtaatcgccaggccaagttcacgcca
agagccatagcgaggataatgaacggagttggaagtccagcttttccgaattcaatctgg
tccaagactcatttctggggaaggtatatgagcgtagacttccgagtgataatggaagcg
gcacaaacagagctaatgaattttgttgatagaaatgcggctttagctacatag
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