Raphanus sativus (radish): 108857135
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Entry
108857135 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
rsz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108857135
04120 Ubiquitin mediated proteolysis
108857135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rsz03110
]
108857135
04131 Membrane trafficking [BR:
rsz04131
]
108857135
04121 Ubiquitin system [BR:
rsz04121
]
108857135
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108857135
Chaperones and folding catalysts [BR:
rsz03110
]
Other chaperones and cochaperones
Others
108857135
Membrane trafficking [BR:
rsz04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108857135
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
U-box type E3
108857135
Multi subunit type E3
STUB1-CHIC2 complex
108857135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_11
TPR_16
TPR_17
TPR_8
ANAPC3
zf-NOSIP
TPR_14
TPR_9
TPR_19
TPR_12
TPR_CcmH_CycH
zf-Nse
Motif
Other DBs
NCBI-GeneID:
108857135
NCBI-ProteinID:
XP_018486573
UniProt:
A0A6J0NS89
LinkDB
All DBs
Position
5:complement(2726492..2728610)
Genome browser
AA seq
282 aa
AA seq
DB search
MVTGAISAMAAKQAERLKEDGNNCFKKERFGAAIDAYTEAITLSPKVPVYWTNRALCHMK
RKDWTRVEEDCRKAIQLDHDSVKAHYMLGLALLQREDYADGVKALQRALDFGRGANPTGY
MVEEIWEELSKAKYMEWELLSARRSWELNSLKETCVAALNQQRALDMSRTEESSEEDYSS
HTEQLRSLDRVFEKAAEEDKPTEVPDYLCCNITLEIFRDPVISPSGVTYERAAILEHINK
VGRFDPITREKLDPSKLVPNLAIKEAVAAYLDKHVWAYKMGS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggtgacaggcgcgatctccgccatggcggcgaaacaagccgagcggttaaaggaagac
ggcaacaattgcttcaagaaggaacgtttcggcgccgccattgatgcttatacagaggcg
ataactttgtcacccaaggttcctgtttactggactaatcgagctctctgccacatgaag
cgaaaggattggactagggtggaagaggattgtcgtaaagctattcagcttgaccatgat
tctgttaaggcccactacatgctaggacttgctttattgcagagggaagattatgctgat
ggagtcaaagcgttgcaaagggctttagattttggaagaggcgcaaatccaactggatat
atggtagaagagatatgggaagagctttctaaggcaaaatacatggagtgggaactgctt
tccgctaggcgctcctgggaattgaacagtttgaaggaaacctgcgtggctgctcttaat
caacaacgtgctttagatatgtctcgaacagaagagtcctcggaagaagactattcttcc
catactgagcagctgagatctcttgaccgagtgtttgagaaagctgcagaagaggacaaa
ccaaccgaggtgccagattacttgtgttgcaacattactcttgagatattccgggatcct
gtgatttctccaagtggggttacatatgaaagagcagctatccttgaacatattaacaag
gtgggaaggtttgatcctataacgcgtgagaaactcgatccatccaaactcgttccaaat
ctggctatcaaagaggcagtggctgcttatctagacaagcacgtttgggcttacaagatg
ggtagttga
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