Raphanus sativus (radish): 108857155
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Entry
108857155 CDS
T06014
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108857155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108857155
03110 Chaperones and folding catalysts [BR:
rsz03110
]
108857155
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108857155
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108857155
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
108857155
Messenger RNA biogenesis [BR:
rsz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
108857155
Chaperones and folding catalysts [BR:
rsz03110
]
Heat shock proteins
HSP60 / Chaperonin
108857155
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
108857155
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108857155
Exosomal proteins of other body fluids (saliva and urine)
108857155
Exosomal proteins of breast cancer cells
108857155
Exosomal proteins of colorectal cancer cells
108857155
Exosomal proteins of bladder cancer cells
108857155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
108857155
NCBI-ProteinID:
XP_018486599
UniProt:
A0A6J0NPI4
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MASTFTATSSLGSLVAAPIAPKLSTSSFGRRQNVCPRRSRPAAIVCAAKELHFNKDGSTI
KKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELEDPVENIGAKL
VRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVHELKL
MSKEVEDSELADVAAVSAGNNPEVGNMIAEAMSKVGRKGVVTLEEGKSAENHLYVVEGMQ
FDRGYISPYFVTDTEKMSVEYDNCKLLLVDKKVTNARDLVGVLEDAIRGGYPILIIAEDI
EQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSVDKAGK
EVLGNASKVVLTKEMTTIVGDGSTQEAVNKRVIQIKNLIEQAEQDYEKEKLNERIAKLSG
GVAVIQVGAQTETELKEKKLRVEDALNATKAAVAEGIVVGGGCTLLRLAAKVDAIKDSLV
NDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDDVKFGYNAATGKYEDLMAA
GIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNSGYGY
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaccttcactgctacatcttcacttggctccttggttgctgctcccattgcc
ccaaagctttctacaagctcatttggaaggagacagaatgtgtgcccaagaagatcccgt
cctgctgcgattgtatgtgcagccaaggagttgcatttcaacaaagatggttctaccatt
aagaaacttcaaaccggtgttaacaagctagccgaccttgttggtgtgacacttggacca
aaagggagaaacgttgttcttgagagcaagtatggatcaccgaaaattgttaatgatggt
gtcactgtcgctagggaggtcgagttggaggacccggttgagaacattggtgcaaagctt
gtcagacaagcagctgcaaagaccaatgacttggctggtgacggtacaacaacatctgtt
gttcttgcacaaggctttattgctgagggtgtcaaggtggtggctgcaggtgcaaaccct
gtattgatcactagaggcattgagaagacagcaaaggctttggttcacgagctgaagcta
atgtctaaggaggttgaagacagtgaacttgcggatgtggcggctgttagtgccggcaac
aaccctgaagttggaaacatgatcgctgaagcaatgagcaaagtaggcaggaaaggtgtg
gtgacacttgaggagggtaaaagcgctgagaaccacctttacgttgtggaaggcatgcag
tttgaccgtggttatatctcaccgtacttcgtgacagacactgagaaaatgtctgtcgag
tacgataactgcaagctgcttcttgttgacaagaaggttaccaatgcaagggatcttgtt
ggtgttctagaggatgctattagaggcggttatccgattctaataatagcagaagatatt
gaacaggaagctttagctactcttgttgttaacaagcttagaggcactttgaaaatagca
gctcttaaagctcctggatttggagagcggaagagccagtaccttgacgatattgccatt
ctaactggagctactgtgataagagaggaagttggtctttctgttgacaaagctgggaaa
gaggttttaggcaacgcctctaaggttgtcctcaccaaggagatgacgaccattgtgggt
gatggtagcacacaggaagcagtgaacaagcgtgtcatacagattaagaatttaattgag
caagcggagcaagactatgagaaggaaaaattgaatgagagaattgcaaagctttctggt
ggagttgctgtaattcaggttggagcacaaactgagacagagcttaaagaaaagaaacta
agagttgaagatgctcttaacgccacaaaggcagcggttgcggaaggtattgttgttggt
ggtggttgcactctgcttcgtctagcagccaaggttgatgccattaaggatagccttgta
aacgatgaagaaaaggttggtgcagacatcgttaaaagagccttgagttaccctctgaaa
ttgatagcaaagaacgctggtgtcaacggaagcgttgtcagcgagaaggtgctagctaac
gatgacgtaaagttcggttacaatgctgcaacggggaagtatgaagatctgatggctgca
ggaatcatcgaccccacaaaggttgtgagatgttgtttagaacatgcagcttccgttgca
aagacgttcttgatgtccgactgtgtggttgtggagatcaaggagccagagccagttcct
gctggcaatccaatggacaattcaggatatggatactga
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