Raphanus sativus (radish): 108857457
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Entry
108857457 CDS
T06014
Name
(RefSeq) autophagy-related protein 18d
KO
K22991
WD repeat-containing protein 45
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108857457
Membrane trafficking [BR:
rsz04131
]
Autophagy
Other autophagy associated proteins
Others
108857457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_2nd
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
ANAPC4_WD40
Beta-prop_Vps41
WDR55
Beta-prop_EML
Beta-prop_RSE1_2nd
Beta-prop_HPS5
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
RMC1_N
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
108857457
NCBI-ProteinID:
XP_018486946
UniProt:
A0A6J0NS15
LinkDB
All DBs
Position
5:25769817..25772887
Genome browser
AA seq
389 aa
AA seq
DB search
MASTVSNSQGFEARNNGAFRSPEPGFGDSDGAELVSVSWNQDYSCFSSGTSHGFRIYNCE
PFKETFRRELKDGGFKIVEMLFRSNILALVGGGPNSQYPSNKVLIWDDHQSRCISEFSFR
SEIRAVKLRRDRIVVVLEHKIYVYNFMDLRLLHQIENLANPRGLCCLSHHMNTSVLACPG
VRRGEVRVEHFGLNMVQIINAHDSNIACMTMTLDGLLLATASTKGTLIRIFNTMDGTRLQ
EVRRGTDRADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVSGEDSHSTEHETSSNSLQA
LVTPASGVNPGSSLSFLRGVLPRYFSSEWSFAQFHVPEVTQFFAAFGAQNTIAIIGMDGS
FYRCSFDPVNGGEMTQLEYVRFLKPETLR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaactgtttccaactcacaagggtttgaagcgcggaataatggcgcttttagg
tctccggaaccaggttttggtgacagtgatggagcagagttggtttctgtttcttggaat
caggattacagctgtttttcttctgggaccagccacggttttcggatatataactgcgag
cctttcaaggaaactttcaggcgagagctcaaggacgggggtttcaaaatcgtggagatg
cttttccgaagtaatatcttggcactcgttggcggtggacctaactctcagtacccttca
aacaaagtattgatttgggatgatcatcagagccgctgcatcagtgagttttctttcagg
tccgagattcgtgcagtgaagctaagaagggatcggattgttgttgttcttgaacacaag
atatatgtctacaatttcatggacctgaggcttcttcatcagattgaaaacctggcaaat
ccaaggggactgtgttgcctctctcatcatatgaatacatctgtgctggcttgtcctggt
gttcgtcgaggagaggtccgtgttgaacattttgggcttaacatggtgcaaatcattaac
gctcatgattcgaatatcgcgtgcatgaccatgacactggatggcttgcttcttgcaact
gccagtacaaagggaactctgattagaattttcaacacgatggatggaactcgtctgcaa
gaggtccgaagaggaacggacagagcagatatctatagcattgctctatcaccgaatgtg
cagtggttggcagtatcaagcgacaaggggactgttcatattttttctcttagggtgaga
gtttctggggaggactcacactccactgaacatgagacgtcttcaaattccctgcaggct
cttgtaactccagccagcggtgtcaaccctggttcgtcattgtcatttctgagaggagtt
ttgccaagatatttcagctcggagtggtcatttgctcagttccatgtaccagaagtcacc
caattctttgcagcatttggtgctcagaacacaattgcgattatcggcatggatggaagt
ttctacaggtgcagtttcgatccagtgaacggaggagagatgacacagcttgaatacgtc
cgctttctgaaaccggagaccctaagatag
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