KEGG   Raphanus sativus (radish): 108857508
Entry
108857508         CDS       T06014                                 
Name
(RefSeq) RING-H2 finger protein ATL77
  KO
K19040  E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108857508
Enzymes [BR:rsz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108857508
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    108857508
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_UBOX zf-ANAPC11 zf-RING_5 FANCL_C zf-RING_16 Prok-RING_1 zf_RING_Vps8_fungal Zn_ribbon_IFT122_C
Other DBs
NCBI-GeneID: 108857508
NCBI-ProteinID: XP_018487002
UniProt: A0A6J0NQG0
LinkDB
Position
5:complement(36094057..36094992)
AA seq 221 aa
MSSDHSPSSSQAFQEHSINSLLSRKLLQQLPFHHNIQQQQAQVPDKNNLSGNILLLLSIL
VCGIICSLGLHYIIRCAFRRSSSFMISDPIPIPSTPRGSAANKGIKKKVLKMFPVVTYSP
EMNLSGVGEECVICLSDFVAGEQIRLLPKCNHGFHVRCIDKWLTQHMTCPKCRHCLVETC
QKILGDCDEADEVEATPRESIEVRIDPVEPEARVSTFRESS
NT seq 666 nt   +upstreamnt  +downstreamnt
atgtcttcagatcactcaccttcttcatctcaagccttccaagaacactccatcaacagc
ttactctcaagaaaattgcttcagcagcttccttttcatcacaacatacaacagcaacaa
gctcaagtacctgacaagaacaacttgagcggcaacattctcctgcttctctctatcctt
gtctgcggtatcatctgctcactagggttgcattacataatccgttgcgcatttagacgt
tcctcgagtttcatgatctctgatcccatcccaatcccgtccacaccacgaggctcagca
gcaaacaaaggcatcaagaagaaagttctcaagatgttcccggtagtgacttactcacct
gagatgaacttgtcaggggttggcgaagagtgtgtcatttgcttgtctgatttcgtagct
ggagaacagatacggctgcttccaaagtgtaaccatgggttccacgttcgttgtatcgac
aagtggcttacacaacatatgacttgtcctaaatgtagacactgtctggttgagacatgt
caaaagatattaggagattgcgatgaagctgatgaggttgaagcaacaccaagggagagc
atagaggtgagaattgatcctgtagaacctgaagcaagagtcagcacttttagagaaagc
agctag

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