Raphanus sativus (radish): 108857546
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Entry
108857546 CDS
T06014
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic-like
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108857546
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108857546
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108857546
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
108857546
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108857546
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108857546
Prokaryotic type
Other AARSs
108857546
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
108857546
NCBI-ProteinID:
XP_018487038
UniProt:
A0A6J0NTJ9
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Position
5:37802213..37805472
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AA seq
626 aa
AA seq
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MEDSANQTTQAMSKLSMDAAPPSSTAETGDGGARSKNALKKELKMKQREEERKRKEEEKA
KQAPKATSQSQKSVASSADDEDMDPTQYFENRLKYLAAEKAKGENPYPHKFAVSMSIPEY
IGKYGSSLNNGDHVEEAEVSLAGRIMSKRASSSKLFFYDLHGEDFKVQVMADASKSGLDE
AEFSKLHANVKRGDIVGVTGFPGKTKRGELSIFPKSFILLSHCLHMMPRKAENVSAKKPE
HWVPGEPRNPEAYVLKDQESRYRQRYLDLMLNVEVRQIFKTRANIISYVRRFLDNQRFLE
VETPMMNMIAGGAAARPFVTHHNDLDMRLYMRIAPELFLKQLIVGGLERVYEIGKQFRNE
GIDLTHNPEFTTCEFYMAFADYNDLMKMTEDMLSGMVKELTGGYKIKYHANGYDKEPIEI
DFTPPFRRIEMIGELEKVANLKIPKDLASEEANKYLIEACARFDVKCPPPQTTARLLDKL
VGEFLEVTCVNPTFIINHPEIMSPLAKWHRSNNVLTERFELFINQHELCNAYTELNDPVV
QRQRFADQLKDRQSGDDEAMALDETFCSALEYGLAPTGGWGLGIDRLAMLFTDSQNIKEV
ILFPAMRPQDDPASVKASLQAENKGE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggaagattcggctaatcaaaccacgcaagcaatgtcaaaactatccatggatgctgct
cccccttcttcgactgccgagactggtgatggaggagctcggagtaaaaatgctctgaag
aaggaactgaagatgaagcagagagaggaagagaggaaacgcaaagaagaagaaaaagcc
aaacaagctcccaaggcaacttctcagagccagaagtcagtggcatcatcagcagatgat
gaggatatggatccaacgcaatactttgagaacagattgaaatatctcgcggcggagaag
gccaagggggagaatccgtaccctcacaagtttgctgtgtccatgtctatccctgagtac
attgggaagtatggtagtagtttgaacaatggggatcatgtcgaagaagctgaagtttct
ctagctgggcggataatgagcaagcgtgcttcctcttccaagctattcttttatgatcta
cacggtgaggatttcaaggtccaggttatggctgatgcaagtaagtcgggattggatgaa
gctgagttttcaaagctccatgcgaatgttaagcgtggtgatattgttggtgttactggg
tttccaggaaaaactaagagaggagagttaagtattttcccgaaatcatttattcttctg
tcacattgcctccacatgatgccaagaaaggctgagaatgttagcgcaaagaaacccgaa
cactgggttccaggtgaaccgagaaatcctgaagcatatgttctgaaagatcaggaatct
cgataccgccagcgttatcttgatctaatgttgaacgtggaggttcgccagatattcaaa
accagagctaatatcatttcctacgtccggagattccttgacaatcaaagattcctggag
gttgagacacctatgatgaacatgattgctggtggagcagctgccaggccctttgtgaca
catcacaatgatctagacatgaggctgtacatgcgcatcgcacctgaactcttcctcaag
caacttattgtcggtggcttggaacgtgtctatgagattgggaagcaattcagaaacgag
ggtattgacctgacacacaatccggagttcacgacttgcgagttctatatggctttcgca
gactacaatgacctgatgaaaatgactgaggatatgttgagtggcatggtcaaggagtta
acaggtggttacaaaatcaagtatcatgctaatgggtatgacaaggagccaatcgaaatc
gacttcactcctccattcaggaggattgagatgataggagagttagagaaggtggctaac
ctcaaaattccaaaagacttggctagcgaagaagccaacaaatatctgattgaagcttgt
gccaggttcgacgtgaaatgtccacctcctcagactacagctcgtttactagataaactt
gttggagagtttctggaagtaacatgtgtgaacccaacgttcatcatcaaccatcccgag
atcatgtcgcccttggcaaaatggcataggtcgaacaatgttctgactgagagattcgag
ctgttcatcaaccaacacgaactctgcaacgcctacactgagttgaacgatcctgtggtt
cagcgtcaaaggtttgctgatcagctgaaggataggcaatccggagacgatgaagcgatg
gctttagatgagactttctgcagtgctttggagtatggattggctcctacaggtggttgg
ggattggggatagacaggcttgccatgctgttcaccgactcacagaacatcaaggaagtt
attctcttcccggcaatgaggccacaagacgatccagcatccgttaaagcttctttgcaa
gcagagaacaaaggagaatag
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