Raphanus sativus (radish): 108857563
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Entry
108857563 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03250
Viral life cycle - HIV-1
rsz03272
Virion - Hepatitis viruses
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108857563
03272 Virion - Hepatitis viruses
108857563
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108857563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108857563
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108857563
Membrane trafficking [BR:
rsz04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
108857563
Exosome [BR:
rsz04147
]
Exosomal proteins
Proteins found in most exosomes
108857563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
Init_tRNA_PT
CoV_S2
NDC80_loop
Motif
Other DBs
NCBI-GeneID:
108857563
NCBI-ProteinID:
XP_018487055
UniProt:
A0A6J0NRF6
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MVPSPSNPXKQIQQFLSSVLSQRGPNSVPYDESTKWLIRQHLLNLISSYPSLEPKTATFI
HNDGRSVNLLQSDGTIPMPYHGVTYNIPVIIWLLESYPRHPPCVYVNPTADMIIKRPHAH
VTPSGLVSLPYLQNWVYPSSNLVDLVSDLGSAFARDPPLYSRRRPQPTPPPSYDSSLTRP
PPPPTPTADQSLARPFPPSPYGRVQHVHHQQQQQSDDAAEVYKRNAINKMVEMVHGDLSS
MRRDREAEAESLLSLQGGLRRREEEINRGLKEMVEEKETLEQQLQIISMNTDVLDSWVRE
NQGKTKTLVDVDVDVDKVFECVDALSKQMLECTASDLAIEDAVYALDKGFQDGVVPFDQY
LRSVRLLSREQFFHRATGSKVRAAQMEAQVHAIAGRLHS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggttccgtcaccgtcaaacccgnncaaacagatccaacaattcctctcctccgtcctc
tcacagcggggcccaaactccgtcccttacgacgagtccacaaagtggctaatccgccaa
cacctcctcaacctaatctcgtcctacccttccctcgagcccaaaacggcgacgtttatc
cacaacgacggccgatccgtcaacctcctccaatccgacggaaccatcccgatgccttac
cacggcgtcacctacaacatccccgtcatcatctggcttttagaatcctaccctcgccac
cctccctgcgtctacgtcaaccccaccgccgacatgatcatcaagcgtccccacgcgcac
gtcaccccctcgggcctcgtctccctcccttatctccagaactgggtttaccctagctcc
aatctcgtcgatctcgtctccgatctcggctccgccttcgctcgcgatcctcccctctac
tcgcgccgccgtccccaaccgactccgccgccgtcgtacgattcgtcgctcacacgtcct
cctcctcctccgactccgacggctgatcagtcgttagcgagaccgtttccgccgtctcct
tacggcagagtgcagcacgttcaccaccagcagcagcagcagtcggacgacgcggcggag
gtttacaagagaaacgcgatcaacaagatggtggagatggtccacggcgatctctcctcg
atgcggagagacagagaagccgaggcggagtcgctgctgagtcttcagggaggtttgagg
aggagggaggaagagatcaacagggggttgaaggagatggtggaggagaaggagacgctc
gagcagcagctgcagatcatctccatgaacactgacgttctcgactcttgggttagggag
aatcaagggaagactaagactttggttgatgttgacgtggatgtggataaggtctttgag
tgtgtggacgcgctctctaagcagatgctggagtgtactgcttcggatctggcgatcgaa
gatgcggtttatgcgttggataaggggtttcaggatggggttgttccgtttgatcagtac
ttgaggagtgtgaggttgctttcgagggaacagttctttcatagagccacggggtctaaa
gttagggctgctcagatggaagctcaggttcatgccatcgctggtagattacattcgtga
DBGET
integrated database retrieval system
