Raphanus sativus (radish): 108857941
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Entry
108857941 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: heat shock 70 kDa protein 5
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
rsz04141
Protein processing in endoplasmic reticulum
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108857941
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108857941
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108857941
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108857941
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108857941
03009 Ribosome biogenesis [BR:
rsz03009
]
108857941
03110 Chaperones and folding catalysts [BR:
rsz03110
]
108857941
04131 Membrane trafficking [BR:
rsz04131
]
108857941
03051 Proteasome [BR:
rsz03051
]
108857941
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108857941
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108857941
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108857941
Spliceosome [BR:
rsz03041
]
Complex B
Other components
Prp19 complex
108857941
Complex C
Prp19-CDC5 complex
108857941
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108857941
Chaperones and folding catalysts [BR:
rsz03110
]
Heat shock proteins
HSP70 / DNAK
108857941
Membrane trafficking [BR:
rsz04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108857941
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
108857941
Proteasome [BR:
rsz03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108857941
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
108857941
Exosome [BR:
rsz04147
]
Exosomal proteins
Proteins found in most exosomes
108857941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
108857941
NCBI-ProteinID:
XP_018487475
UniProt:
A0A6J0NSP0
LinkDB
All DBs
Position
1:complement(7239425..7241813)
Genome browser
AA seq
653 aa
AA seq
DB search
MATKSDKAIGIDLGTTYSCVGVWMNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQ
VALNPHNTVFDAKRLIGRRFTDPSVQSDMKHWPFKVVSGPGDKPMIVVSYKNEEKQFSPE
EISSMVLVKMKEVAESFLGQDVKNAVVTVPAYFNDSQRQATKDAGSISGLNVLRIINEPT
AAAIAYGLDKKGTKTGERNVLIFDLGGGTFDVSLLTIEEGVFEVKATAGDTHLGGEDFDN
RLVNHFVAEFKRKHKKDVSGNARALRRLRTACERAKRRAKRTLSSTAQTTIEIDSLHEGV
DFYATISRARFEEMNMDLFRKCMDPVEKVLRDAKLDKSRVHEVVLVGGSTRIPKIQQLLQ
DFFNGKELCKSINPDEAVAYGAAVQAAILTGEGSDKVQDILLLDVAPLSLGIETAGGVMS
VLIPRNTTVPCKKEQVFSTYADNQPGVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGV
PQINVCFDMDANGILNVSAEDKTAGVRNQITITNDKGRXSKEEIEKMVQDAERYKAEDEQ
VKKRVEAKNALENYAYNMRNTVKDEKLAQKLDQGDKQKIEKAIDETIEWIEGNQLAEVDE
FEYKLKELEGICNPIISKMYQAGAGAGAGYPDGGVPANGGSGAAGGPKIEEVD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaaatcagacaaggctatcggcatcgatctcggcaccacatacagctgcgtc
ggagtgtggatgaacgaccgcgtcgagatcatccccaacgaccaaggaaaccgaaccaca
ccttcctacgtcgcgttcaccgatacagagcgtttgatcggcgacgcggccaagaaccag
gtggcgttgaaccctcacaacaccgtcttcgacgcgaagcgtctcatcggtcgtagattc
accgacccttccgttcagagcgacatgaaacactggcccttcaaagtcgtctcgggtccc
ggagacaaaccgatgatcgtcgtctcgtacaagaacgaggagaagcagttctctccggag
gagatatcctccatggtgctggttaaaatgaaggaagtggccgagtctttcctgggccag
gatgttaaaaacgccgtcgttacggtccctgcgtacttcaacgactctcagagacaggcc
acgaaggacgccgggtctatctccgggctcaacgttctgcggatcatcaacgagccgact
gctgctgccatcgcctatgggttagacaagaaagggaccaagacaggtgagaggaacgtg
ttgatattcgatctcggcggcgggacgtttgatgtttcgttgctgacgatcgaggaaggc
gtcttcgaggtgaaagccacggctggagatactcacctcggaggggaagactttgacaac
aggctcgtcaaccatttcgttgcggagttcaagaggaagcacaagaaggatgtcagcggg
aacgcgagggcgttgaggaggctgagaacggcctgcgagagagcgaagaggcgagcgaag
aggacgctttcctccacggctcagacgactatagagatcgattctttgcacgagggtgtt
gacttctacgcgacgatatcgcgtgcgaggttcgaggagatgaatatggatctgttcagg
aagtgtatggatcctgtggagaaagttttgagagatgctaagcttgacaagagccgtgtc
catgaggtggttctcgtcggaggatccacgaggatacctaagattcagcagcttttgcaa
gactttttcaacgggaaggagctctgcaaaagcattaacccggacgaagctgtcgcctac
ggagctgcggttcaggcggcgattctgaccggtgaagggagcgacaaggtgcaagatatt
ctgcttctcgacgtggcgccgctgagccttggaatcgagacggctggtggagtgatgtct
gtgttgatcccgaggaacacgacggttccttgtaagaaggagcaggtgttctccacctat
gcggacaaccagccgggggttctgatccaagtctacgaaggagagcgcgcgaggacgaaa
gacaacaaccttctcgggacctttgagcttaaaggcatccctcctgctccgcgtggagtc
cctcagatcaatgtttgcttcgacatggacgccaatgggatcttgaacgtgtcggcggag
gataaaaccgcgggtgtgaggaaccagatcacgatcacgaacgacaaagggaggntgagc
aaagaggagattgagaagatggtgcaagatgctgagaggtacaaggccgaggatgagcag
gtgaagaagagagtggaggccaagaacgcgctggagaactatgcttacaatatgaggaac
actgtcaaggatgagaaactggcgcagaagctggatcaaggggataagcagaagatcgag
aaggcgattgatgagacgatagagtggattgaaggaaaccagctggcggaagttgatgag
tttgagtataagttgaaagagctggagggtatttgcaacccaatcatctccaagatgtat
caggctggtgccggtgccggtgctggatatcccgatggtggtgtgcctgcaaacggtggc
tcaggtgctgctggaggtccaaagatagaagaggttgattag
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