KEGG   Raphanus sativus (radish): 108858357
Entry
108858357         CDS       T06014                                 
Name
(RefSeq) LOW QUALITY PROTEIN: receptor for activated C kinase 1B
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03010  Ribosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    108858357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108858357
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsz04147]
    108858357
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     108858357
Exosome [BR:rsz04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108858357
  Exosomal proteins of colorectal cancer cells
   108858357
  Exosomal proteins of bladder cancer cells
   108858357
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 WDR55 DSE1_N Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_TEP1_C ASA1 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_Aladin CFAP251_N Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_NOL10_N TRM82_WD Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 Beta-prop_WDR19_1st PROPPIN Beta-prop_WDR75_2nd Beta-prop_Vps41 WD40_like Tricorn_2nd eIF2A DUF7899 Beta-prop_pof12 Beta-prop_NUP159_NUP214 Tricorn_N
Other DBs
NCBI-GeneID: 108858357
NCBI-ProteinID: XP_056851203
UniProt: A0A9W3CHX7
LinkDB
Position
1:complement(21727566..21728801)
AA seq 328 aa
MAEGLVLKGTMCAHTDMVTAIATPIDNSDTIVTSSRDKSIILWKLTKDXKSYGVAQRRLT
GHSHFVEDVALSSDGQFALSGSWDGELRLWDLATGDSTRRFVGHTKDVLFVAFSNDNRQI
VSASRDGTIKLWNTLGECKYTIGSDQGDGHKQWDSCVRFSPSTLVPTIVSALWDQTVKVW
NLQNCKVRSTLAGHSGYLNTVVVSPDGSLCASGGKDGAILLWDLAEGKKLYSLEAGSIIH
SLCFSPNRYWLCAETENSIRIWDLESKSVFEDLKVDLKAEAERSDASVGTGNKTKVIYCT
SLNWSADGSTLFSGYTNGVIRVWGLGRY
NT seq 987 nt   +upstreamnt  +downstreamnt
atggctgagggactcgtcttgaaaggcacaatgtgcgcccacaccgacatggtcaccgcc
atcgccaccccaatcgacaactccgacaccatcgtcacatcctctcgcgacaagtccatc
atcctctggaaactcaccaaggacngaaaatcctacggcgtagctcagcgccgcctcacc
ggccactctcatttcgtcgaggacgtcgctctctcctccgacggacagttcgctctctcc
ggaagctgggacggtgagcttcgtctctgggacctcgccaccggtgactccactcgccgt
ttcgtgggacacacgaaagacgttctcttcgtggccttctcaaatgataaccgtcagatt
gtctcggcctctcgtgacggtacgatcaagctttggaacacgcttggagagtgcaagtac
acgatcgggtccgatcaaggtgatggacacaagcagtgggatagttgcgttaggtttagt
cccagcactcttgttccgaccattgtgtctgctttgtgggatcagacagtgaaggtgtgg
aaccttcagaactgtaaggttaggagcactctcgctggtcactctggttacctcaacact
gtggttgtgtcgcctgatggttcgttgtgtgctagtggtgggaaagatggtgcgatcttg
ctttgggatttggctgaagggaagaagctttactctctcgaggctggctcgattattcac
tctctttgcttcagtcccaacaggtactggttgtgcgcagagacggagaatagtattagg
atatgggatcttgagagcaagagtgtttttgaggatttgaaggttgatctcaaggctgag
gctgagaggtctgatgcatctgtcggaaccggaaacaagacaaaggtgatctattgcaca
agcttgaactggagtgcagatggaagcacattgttcagtggatacactaatggagttatc
agagtttggggtcttggtcgttattag

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