Raphanus sativus (radish): 108858388
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Entry
108858388 CDS
T06014
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108858388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108858388
Enzymes [BR:
rsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108858388
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108858388
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
CSPP1_C
Motif
Other DBs
NCBI-GeneID:
108858388
NCBI-ProteinID:
XP_018487825
UniProt:
A0A6J0NTQ4
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All DBs
Position
5:complement(17334587..17341339)
Genome browser
AA seq
1185 aa
AA seq
DB search
MVLKRKDTVPNTEDFKELRNLVKHHIESFDYMTEKGLEVMFSRINPVTVNDPSSDSKWRI
RLENPKVFSPQKESLSSNSRKESLYPFECRQAKISYTGALMADVCFQYGNGLGAGFGTVV
REKFEFGELPIMLMSNRCHLQGADCRKLLKYKESTSEMGGYFILNGIERVFRCVIAPKRN
HPTGMIRNSFTGKREGYSDKAVAIRCVRDDQSAVTIKVYYNRNGSARVGFWIGGREFLLP
VGLVLKALTETNDEEIYESLNCCYNEHYGRGDGSVGTQLVRERAKIILDEVRDLGLFTRD
QCRKYLGEHFKSDLDGQENASYPAVAEAVLHNYIFVHLDNDDDKFNLLIFIIQKLFSLVD
QTSLPDNPDSMQNQEILVPGHLITIYLKEKLEEWLRKCKSTIEEEMRNTKSKFDFENHAD
IKKLMSKALPRSIGTSIESLLKSGCMTTRSSLDLQQKVGYTVQAERLNFLRFLSFFRAVH
RGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRISSQFDSNGNIRDF
LKIRKSVVDVLVGVGMVPSLPKLVRAGPPKVITVLLDGQVVGSLSSNLVTKVVAYLRRLK
VEAPSVIPEDLEIGYVPTSMGGSYPGLYLASCPARFIRPVKNTSIPSNNIELIGPFEQVF
MEISCPDGGNGGRNNSSLATHEEIDPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMA
YSTQALRFRADQKIYHLQTPQSPVVRTKTYTTYNIDENPTGTNAIVAVLAHTGFDMEDAM
ILNKSSVERGMCHGQIYQTEAIDLVDEKSRTGSNKSFRRSNADKSAQSCIDADGLPYVGQ
KILPNEAYCSIYDSVADETKQMKRKGTDPVIVDFVSLDMKSKKKANIRFRHARNPIIGDK
FSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLR
GEFVDATPFRDAVKKTNGQEESESSLLVDDLGSMLKQKGFNHYGTETLYSGYLGVELKCE
IFMGPVYYQRLRHMVSDKFQVRSTGHVDQLTRQPIKGRKRGGGIRFGEMERDSLLAHGAS
YTLHDRLHTSSDHHIADVCSLCGSLLTSSVLIVPQKKLIREIGKLKLPPGRSPKKVTCHS
CKTSKGMETVSMPYVFRYLAAELASMNIKMTLRLSNSEESDSDGV
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggttctgaaaaggaaagacacggttccgaacacggaagacttcaaggagcttcggaat
ctcgtcaagcaccacatagagtctttcgattacatgacagagaaagggctcgaggttatg
ttctctcgaatcaaccccgtcaccgttaacgacccatcctccgacagcaagtggagaatt
agattagaaaatccgaaagtattctctcctcagaaggagagtttgagttctaattcgagg
aaagagtctttgtatccctttgagtgtcggcaggcgaagatatcgtacacgggagcgctt
atggcagatgtttgctttcagtacgggaatggactcggagctggatttggaaccgttgtc
agagagaagtttgagtttggtgaattacctattatgctcatgtcaaatcgttgccactta
cagggtgctgattgcaggaagcttctaaagtataaagagtcaacttctgaaatgggaggg
tactttattctgaatgggattgagagagttttccgatgtgttattgcaccaaagcggaac
cacccaacgggaatgatccggaactcattcactggaaaacgagaaggatacagtgacaag
gcagttgctattaggtgtgttagagacgaccagtcggctgtcactattaaagtgtattac
aatcgcaatggaagtgcccgagttggattctggatagggggaagggaatttttgcttcct
gtcggccttgttctcaaggctctcactgaaaccaacgatgaggaaatatacgaaagcttg
aactgttgttacaatgagcattacggaagaggagatggatctgttggaacccaactcgta
cgtgagcgagccaaaatcattcttgatgaagtgagagacttgggtcttttcacccgggac
cagtgccgcaagtatttaggagagcattttaaatctgatcttgatgggcaagaaaatgca
agctatcctgctgttgctgaagctgtgctgcataattatatttttgttcaccttgacaac
gatgacgacaagttcaatttgctcatcttcataattcaaaagctcttctctctggtggat
cagacttctttacctgacaatccggattctatgcaaaatcaggaaattttagtcccgggt
caccttataacaatttacctcaaggaaaaacttgaagagtggctgcggaaatgcaaaagt
actattgaagaggagatgcgtaatactaagagcaaatttgactttgaaaatcatgctgat
atcaagaagcttatgagcaaagctcttcccaggagtattggcacgtcaattgagtctttg
ttgaaatcaggatgtatgactacaaggtctagtttggatttacagcagaaagtaggttac
actgttcaggcggagaggttgaactttctccgtttcctctcatttttccgggcggttcat
cgaggtgcttcttttgctggacttcggacaacaactgtgaggaagctgcttcctgaatct
tggggttttctatgccctgttcacactcctgatggggagccctgtggattactgaatcat
atgacacgtacttgccgaatctcttctcaattcgattcaaatggaaacatcagagacttt
ctgaagattagaaagtcagttgttgatgttcttgttggggttgggatggtaccttcattg
ccaaaacttgttcgagctggaccaccaaaagtgattactgttcttttagatggccaagtt
gttggatctctatcttctaacttagtcaccaaggttgtcgcttatttgcggagactcaaa
gtggaggctccttcagtaattcctgaagaccttgaaatcggatatgtaccaacaagcatg
ggtggatcttatcctggattgtatttggcatcatgtcccgcaagatttattaggcctgtt
aaaaatacatctattccatccaacaatattgaactgattggaccatttgagcaggttttt
atggaaataagctgtcctgatggtggaaatggaggaaggaataactcttcccttgcaact
catgaggaaattgatccaactgggatgataagtgtggttgctaatcttacaccctggtca
gatcataaccaaagtccacgtaacatgtatcagtgtcagatggcgaaacaaaccatggct
tactctactcaagcactccgattccgtgctgaccagaagatttaccacttgcagactcct
caatcccctgtggtgcgcacgaaaacatacaccacatacaatattgatgagaatccaaca
gggactaatgcaatagttgctgtcctggctcatactggatttgatatggaagatgctatg
attctaaacaaatcatctgtggagcgggggatgtgtcatgggcaaatataccagacagaa
gcaattgatttggtagatgagaaaagccgaacgggtagtaataaaagttttaggaggagc
aatgctgacaaatccgctcaatcttgtattgatgccgatggattaccatatgttggacag
aaaattttaccgaatgaggcgtattgttctatctatgatagtgtagctgacgagacaaag
caaatgaagcgaaaaggaacagaccctgtcatcgttgactttgtctctcttgacatgaaa
agcaagaagaaggcaaacattcgatttaggcatgccaggaatcccataatcggtgacaaa
ttcagtagtagacacggtcaaaagggtgtttgctcgcaactctggcctgatattgatatg
ccctttaatggagtcactggaatgcgtcctgatctcatcattaaccctcacgctttccca
tctagaatgacaatcgctatgcttttggaatctattgctgctaagggaggtagtctgcgt
ggggagtttgtagatgcaacaccgtttcgtgatgcagtaaagaaaacaaacggacaagag
gagagcgaatcaagtttacttgttgatgatcttggctccatgttgaagcaaaaaggtttc
aatcactatgggactgagacattgtacagcggctacttaggagtagagctcaagtgtgag
atttttatgggacctgtttactaccaaagactgcgtcacatggtctcagacaagttccag
gtcagatccacaggacacgttgatcagctaactcgtcagccaatcaaaggaaggaaacga
ggtggagggattcgatttggtgaaatggaaagagactcattgcttgctcatggagcttcc
tatacattacacgacaggcttcacacctcatcagatcaccacattgcggatgtgtgttct
ctgtgcggaagcttgctgacttcttcggttttgatcgttccgcagaagaagctgattcga
gagattggaaagttaaagttgcctcctggtaggagtccaaagaaggtaacatgccattct
tgcaagacaagcaaagggatggaaactgtttcaatgccgtatgtgttcaggtacttagct
gcagaattggcgtcaatgaatattaagatgactcttcggttaagcaacagtgaagaaagc
gacagcgatggagtctaa
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