KEGG   Raphanus sativus (radish): 108858634
Entry
108858634         CDS       T06014                                 
Name
(RefSeq) pre-mRNA-splicing factor 38-like
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108858634
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsz03041]
    108858634
Spliceosome [BR:rsz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    108858634
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    108858634
SSDB
Motif
Pfam: PRP38_assoc PRP38 HIND
Other DBs
NCBI-GeneID: 108858634
NCBI-ProteinID: XP_018488030
UniProt: A0A6J0NUA9
LinkDB
Position
5:26663088..26664765
AA seq 257 aa
MANPRVSFSDVKSGRCSSVVEARMLSFWEARDVKRGGELMWIDMLMVDINVRFELRHVDE
VIEELLTKDYSCDIAMPRLKKMCTLEQNGSLELRKSVLEDDFEEDEEEKEENEGIADGYE
DEDEQDHHCRSPEREIERDRRRDSHRHRDRDYDRDYDRERGRGRDRDRERDRDLYRGRDR
EWGRDRDREGDRRDRARRRSRSTSKDRKWHETDDDRDREAPKKKEEKKMKEDGTDHPDLE
IAEANRLRAYLGLKPLR
NT seq 774 nt   +upstreamnt  +downstreamnt
atggctaatccgagagtttctttctccgatgtgaagtccgggaggtgttcgtccgtcgtg
gaggcaagaatgttgagtttctgggaggccagggacgtcaagcgtggtggagagctgatg
tggattgacatgctgatggtggacatcaacgtaaggtttgagttgagacatgtggatgaa
gttattgaggagcttttgactaaggattattcttgtgatattgcaatgccacgtttgaag
aagatgtgtacgctggagcagaatggttcgttggagctgaggaaaagtgttttggaagat
gactttgaggaagatgaagaagaaaaggaggagaatgaagggattgctgatggatatgaa
gatgaagatgagcaggatcatcactgtaggagtcctgaaagagaaatagagagggatagg
agacgcgacagtcatagacacagggatcgtgattatgatagagactatgacagagaacgt
gggcgtggtcgagatcgggatagggagagagacagagatctctatagaggccgggatagg
gagtggggacgagacagagatagagaaggggacagaagagacagagcaaggcgtagaagt
agaagcacaagtaaggatcgtaagtggcacgagactgatgatgaccgagatagggaggca
ccgaagaaaaaggaagagaagaagatgaaggaagatggaactgatcatccggatcttgaa
attgcagaagctaataggctgagagcatatttgggactgaaacccttgagataa

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