Raphanus sativus (radish): 108858716
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Entry
108858716 CDS
T06014
Name
(RefSeq) putative two-component response regulator ARR19
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108858716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108858716
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
108858716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
108858716
NCBI-ProteinID:
XP_056866754
UniProt:
A0A9W3DSG0
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Position
5:29055844..29058305
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AA seq
605 aa
AA seq
DB search
MSEGNRTDDGDRTLFKQQETSQISSFLNEFPASTNVLVVEPNFVTLLKMKKLMSKYGYQV
TIYADAESALAFLRNREHEINLVIWDFHMPGTNGIQALKIICTEMDLPVLIMSDDDRTTS
VMEAMVHGACYYVTKPVRKEVLANIWQHIVRKRMMPKLSVIPPVQLDGVHNQDSFKQDKD
DPMPVDQGNSEQNINMIGENLPIQSDSVQSDGLDQDNNDSRTTSPYNGGQNIDGEERRQL
KKRMEWTRDLEEKFHKAIDDLGGAKKANPKRLLKRLEEMNVKGLTRRIVCSHLQKYRLSL
QGKQTTQPMQEFRWSRACTNSPLLDWNNVHSATSSLINGGASYPPARKQYQNGYMAVNNN
NTASSSLMTGRATYPVQDNQYQNGYMEVNNNNTALLSLMSGRATYPVQDNQYQNGYMEVN
NNHAASPSLMNGRATYPVHENQYQNGYMEVNNNLAASSSNGRATYPVQDNQYQNGYLGVN
NNQVMTNTMPRLPYDLDHDHHLQKQKLEQQHMLSNQLKPENASSSDIEEDRGLTYTVPRL
PYDLSHGNHLQQQQEHQLPHRWNNVMSNNEPELASGNGVTGPEGVDPSLPYDPNELFING
YNYNQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagggaaatagaaccgatgatggcgacagaactctctttaagcagcaagaaact
tctcaaatcagctcttttctcaacgaatttccggcgagtactaatgttcttgttgtcgaa
cccaattttgtaactttacttaagatgaaaaaactcatgagcaaatatggctatcaagtg
acgatttatgcggatgcagaatcagctctcgcgtttctgagaaaccgtgaacatgagatt
aatctcgtgatctgggattttcatatgcctggaactaatggaatccaagctctcaaaatc
atttgtacagagatggatctgcctgtcctaattatgtctgatgatgaccgaacaacatcg
gtgatggaagcaatggttcatggtgcatgctactatgttacgaaaccagttagaaaggag
gtcttagccaatatatggcaacacattgtacgtaaaaggatgatgcctaaattaagtgta
attccaccggttcaattagatggggttcataatcaagacagtttcaagcaagacaaagat
gaccccatgcccgtggaccaaggtaatagtgaacaaaatatcaatatgataggagaaaat
ctaccaatccaatcagattcggttcagagtgacggtttagaccaagacaacaacgattca
cggaccacaagcccatacaacggtggacaaaacattgatggagaagaaagaagacaactg
aagaaacggatggagtggactagagatcttgaagagaaatttcacaaagccatcgatgat
cttggtggtgcaaaaaaagctaatcccaagcgacttctcaaaaggctggaagaaatgaat
gtcaaagggctcactagaagaattgtgtgtagtcatcttcagaaatatcgtcttagtctt
cagggaaaacaaaccactcaaccgatgcaagagtttcgttggtcccgtgcatgtacaaat
tcacctctcttagattggaacaatgttcacagtgcaacatcgtcccttataaatggtgga
gcctcttatcccccggcccggaagcaatatcaaaatggctacatggcagtgaacaacaac
aacactgcatcatcgtcccttatgactggtcgagccacttacccggtccaggacaatcag
tatcaaaatggctacatggaagtgaacaacaacaacactgcattattgtcccttatgagt
ggtcgagccacttacccggtccaggacaaccagtatcaaaatggctacatggaagtgaac
aacaaccacgctgcatcaccgtcccttatgaatggtcgagctacttacccagtccatgaa
aatcagtatcaaaatggctacatggaagtgaacaacaacctcgcggcatcatcgtccaat
ggtcgagctacttacccggtccaggacaatcagtatcaaaatggctacttgggagtgaac
aacaaccaggtcatgaccaatactatgcctcgtttgccatatgatcttgaccatgatcac
catttgcagaagcagaagcttgaacaacaacatatgctttctaatcaattgaagcctgaa
aatgcttccagcagcgatatagaagaggatcggggactgacgtatactgtgcctcgtttg
ccctatgatctcagccatgggaaccatctccagcagcaacaagaacatcagcttcctcat
cgatggaataacgttatgagtaacaatgaaccggaactagcttccggcaatggtgtaacg
ggccccgagggggttgatccaagtttaccgtatgacccaaacgagctctttatcaacggg
tataattacaatcagtag
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