Raphanus sativus (radish): 108858824
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Entry
108858824 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: protein indeterminate-domain 6, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108858824
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108858824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-4th_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
C2HC_ASCIZ
zf-C2H2_4
Zn_ribbon_8
EPF
Motif
Other DBs
NCBI-GeneID:
108858824
NCBI-ProteinID:
XP_018488197
UniProt:
A0A6J0NTT2
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All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MDLCRISKSKPXEKMSSSNNNTISSSSSLSFPLLATGANNFNREETAMTMNQQRNSVSPP
PRRQRNKPGNPSSDAEVIALTPEEIMATYRFICEVCNKGFQREQNLQLHRRGHGLSYTLK
QKSDEEVRRKVYVCPEPTCVYHDPSRALGDLTGIKKHYYRKHGEKKFKCDKCSRCYAVES
DYKAHSKICGTKEYRCVCGTKFSRKDSYDTHRTFCALLVEPARNPTVGFTEMAAAAGGSG
GRHGFYGGASPALTHNHFGNNSNTGFAPLAAGYNLNRSSPQTYEDFVPQPTNPNHGPTNF
PMRYPSNQELLAQNDQNLMNQHGLINSNNNNNLFNPGYFQDNTKNLSDQTGVPSLFNHAD
NNVPSALPRGSSVAANNFGGSGNGNFQGQMNSLAATSDHQTRPGSSIFDHRFGNNLSMGG
TGRQTLDFLGVNGRGGRNGPPLDVNMKFPNPNNPFENV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggatctttgtagaataagcaaaagcaaacccnntgagaagatgtcttcatcaaacaac
aacacaatatcatcatcctcctctctgtctttccccctcttagccaccggagcaaacaac
ttcaaccgtgaagagacggcgatgacaatgaatcaacaacgcaactccgtttctccacca
cccaggagacaaagaaacaaaccaggaaacccaagttcagatgctgaagtgatagccttg
actccagaggagataatggcgacgtacaggtttatctgtgaagtatgcaacaaaggattt
caaagagaacagaatctccagcttcacaggagaggacacggcctttcttataccttgaaa
caaaagtctgacgaagaagtaaggaggaaggtgtatgtttgtccggagcccacgtgcgtc
taccatgatccgtcccgtgctctcggagacctcacaggaatcaagaagcattattaccga
aagcacggtgagaagaagtttaaatgcgataaatgctcaaggtgttacgctgttgaatct
gattacaaagcccactctaagatttgtggtaccaaagagtatcgatgtgtttgtggtacc
aaattctctagaaaagacagttacgacacgcataggacattctgtgcattactagtagag
ccagcaagaaaccctaccgtgggcttcacggaaatggcagcagccgctggtggaagtggt
ggcagacatggcttttacggcggcgcttctcctgctctcactcacaaccattttggtaac
aactcaaacactggttttgcccctctagctgcaggttacaatctgaaccgttcatcgccc
caaacatatgaagactttgttcctcagcccacaaaccctaaccatggtcctactaatttc
cccatgcgatacccttcaaaccaagaactgttggcacagaacgaccagaatctcatgaac
cagcacggtctgatcaacagcaacaacaataacaacttgttcaatccaggatactttcaa
gacaacactaagaacctctctgatcagacaggtgttccttctcttttcaaccatgctgac
aacaacgttccttctgctctgcctagagggtcaagtgtggccgctaataactttggaggc
agtggtaatggaaactttcaaggtcaaatgaactctctagctgcgacaagtgatcaccaa
acccggcccggtagcagcattttcgaccatcgtttcgggaacaatctaagcatgggaggc
actggtaggcagacattggactttcttggcgtcaatggtcgtggtggtcgtaatggacct
cctttggacgttaacatgaagtttccaaatccaaataatccattcgaaaatgtttga
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