Raphanus sativus (radish): 108859152
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Entry
108859152 CDS
T06014
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108859152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108859152
Spliceosome [BR:
rsz03041
]
Common components
Common spliceosomal components
SR proteins
108859152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Nup35_RRM_2
RAP1
Motif
Other DBs
NCBI-GeneID:
108859152
NCBI-ProteinID:
XP_018488512
UniProt:
A0A6J0NXT9
LinkDB
All DBs
Position
5:complement(34132169..34135077)
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AA seq
289 aa
AA seq
DB search
MSGRFSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHARDAED
AVDGRDGYNFDGSRLRVELAHGGRGQSSGDRRGGYRGGGGGYGGGGGGGSARFGVSRHSE
FRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDD
TEFRNPWARGYIRVKKYESSQSRSPSRSRSRSRSRSRGRGRSSSRSISRSRSPRKDLSKS
PRRSLSRSISKSRSPSPDRKKSPPRAMSRSRSRSRSLSKSPAKVREGKE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgattttctcgttccatctatgttggcaacttgcccggcgacattagggag
tccgagattgaagatctcttttacaagtatggccgcatagttgatatcgaattgaaggtt
ccacctcgtcctccatgctattgctttgttgagtttgagcatgctcgggacgcggaagac
gccgtcgacggccgtgatggctacaactttgacggctctcgcttgagggttgagcttgcc
catggtggtcgagggcagtcttctggtgatcgtcgtggtggataccgtggtggaggtggt
ggctatggtggtggaggtggtggtggatctgcccggttcggcgtctcacgacactctgag
ttccgagttattgtccgtggacttccgtcatctgcttcatggcaagatttgaaggatcat
atgcggaaagctggtgatgtgtgctttgctgaggtcactcgtgacagtgatggaacttat
ggtgtcgttgactacaccaattatgatgacatgaagtatgctataaggaagcttgatgat
acagagttcagaaacccctgggctagaggctatatcagggttaagaaatatgaaagctcc
cagtcgagaagcccaagcagaagcagaagcaggagtagaagccgtagcagaggccgtggt
cgcagctctagccgcagcattagcagaagcaggagcccaaggaaggatcttagtaaatca
ccaagacggtccctttccagatcgatatcaaaatctagatcgccatctcccgacagaaag
aagagtcctcctagggcaatgtcgaggtccaggtctaggtctaggtctctttcaaaatca
cctgccaaggttcgggaaggcaaagagtga
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