Raphanus sativus (radish): 108859155 Help Entry 108859155         CDS       T06014                                  Name (RefSeq) clathrin heavy chain 1   KO K04646   clathrin heavy chain Organism rsz  Raphanus sativus (radish) Pathway rsz04142   Lysosome rsz04144   Endocytosis rsz05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:rsz00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     108859155    04142 Lysosome     108859155  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     108859155  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:rsz04131]     108859155   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:rsz04147]     108859155 Membrane trafficking [BR:rsz04131]  Endocytosis   Clathrin-mediated endocytosis    Clathrin     108859155 Exosome [BR:rsz04147]  Exosomal proteins   Proteins found in most exosomes    108859155 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B Motif Other DBs NCBI-GeneID:  108859155 NCBI-ProteinID:  XP_056842304 UniProt:  A0A9W3BSQ1 LinkDB All DBs Position 5:complement(3912424..3921345) Genome browser AA seq 1710 aa AA seqDB search MAAANAPITMKEVLTLPSIGINQQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ PLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIEAKAKLKSYQMPEQVSFWKWI TPKMLGLVTQTSVYHWSIEGDSEPVKMFDRTANLANNQIINYKCSPNEKWLVLIGIAPGS PERPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSILISFASKSFNAGQVTS KLHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVAMQVSHKFNLIYVITKLGLLFVYDL ETASAIYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGQLNNLEL AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ AGQTPPLLQYFGTLLTRGKLNSYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQ GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYIQSLKHYSELPDIKRVIVNTHAI EPQALVEFFGTLSSEWAMECMKDLLLVNLRGNLQIIVQACKEYCEQLGVDSCIKLFEQFK SYEGLYFFLGSYLSMSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS NNNPEHFLTTNPYYDSKVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY VVERMDGDLWDKVLMEENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVDAQLYE EAFAIFKKFNLNVQAVNVLLDNVRSIERAVEFAFRVEEDSVWTQVAKAQLRDGLVSDAIE SFIRADDATHFLEVIRATEDANVYDDLVRYLLMVRQKVKEPKVDSELIYAYAKIERLGEI EEFILMPNVANLQQVGDRLYDEALYEAAKIIYAFISNWGKLAVTLVKLQQFQGAVDAARK ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEFYQNRGCFNELISLMESG LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYI QYDEFDNAATTVMNHSPEAWEHMQFKDIVAKVANVELYYKAVHFYLQEHPDIINDLLNVL ALRLDHTRVVDIMRKAGQLRLIKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL HDSFDQIGLAQKIEKHELVEMRRVAAYIYKKAGRWKQSIALSKKDNMYKDCMETASQSGD HDLAEQLLVYFIEQGKKECFATCLFVCYDLIRPDVALEHAWINNMLDFAFPYLLQFIREY SGKVDELIKDKLEAQKEVKAKEQEEKDVMSQQNMYAQLLPLALPAPPMPGMGGGPGMGGG YGPPPQMGGMPGMPPMPPMPPYGMPPMGGY NT seq 5133 nt NT seq  +upstreamnt  +downstreamnt atggcggcagccaacgcccccatcacgatgaaggaggtcctaacgcttccgagcattggg atcaatcagcagttcatcacgtttacgaatgttactatggagtctgacaagtacatatgt gtgcgagagacggcgcctcagaacagcgttgtgattattgatatgaatatgccgatgcag cctcttaggagacccataactgctgattctgcacttatgaaccccaactcgaggatcctt gccttgaaagctcaagttccaggaactactcaggaccatctgcagatatttaacatcgaa gcaaaagcaaagttgaagtcatatcagatgcctgagcaggtttctttttggaaatggatt acaccaaagatgttggggctggtcacacaaacatccgtgtatcattggtcgattgaaggt gattctgagcctgttaagatgtttgataggacagccaatttggccaacaatcaaattatt aactataagtgctctcccaatgagaagtggttggtgttgattggtattgcccctggctct cctgagaggccacaattggtaaaagggaatatgcagcttttctctgttgatcaacagcgg agtcaggcccttgaagcacatgctgcttcatttgcccagtttaaggtccctgggaatgag aatccttctattcttatatcctttgcaagcaagagctttaacgctggacaggtaacatca aaattgcatgtcattgagcttggcgcccaaccaggaaaaccatcattctcaaagaagcag gcagatctcttcttccccccagattttgctgatgattttcctgtagccatgcaggtctct cacaaatttaacttgatatacgtcatcaccaagcttggcctgttgtttgtatacgattta gagacggcttctgccatctacagaaatcggataagcccagacccaattttcttgacttct gaagcttcttcagttgggggtttctatgccattaataggcgaggacaagttctcctggct acagtaaatgaggctacgataataccttttatcagcggtcaattgaacaatttggaactt gctgtcaatctggctaaaagaggaaacctccctggtgcagaaaatctggttgtccagcgg tttcaagagttatttgctcaaacaaagtacaaagaggctgccgagcttgctgctgaatct cctcaggggattctacggacacctgatacggtggctaaattccagagtgttccagtacaa gcagggcaaactcctccattgttacagtattttgggacccttttgactagaggaaagctc aattcatatgagtctttggaactgtctcgccttgttgtgaatcaaaacaagaagaacctc ttggaaaactggttggcagaggataagttagaatgcagtgaagaacttggagaccttgtc aagactgtagataatgacctggctctgaaaatatacatcaaagctcgagctactccaaaa gttgtagcagcttttgcagagcgaagggagtttgacaaaatactgatttactcaaagcag gttgggtacacacctgattacatgtttcttttgcaaaccatactccgtacggatccccag ggagcagtaaattttgctttaatgatgtcccaaatggaaggaggttgtccagttgactac aacaccatcactgatcttttccttcagagaaacctgatccgtgaagcgactgctttcctt ctggatgttctgaagccaaatttacctgagcatgcttttctgcagactaaggttctggag atcaatttggtaacctttcccaatgtggctgatgcaattttagcaaatgggatgttcagc cactatgaccgccctcgtgttgctcagctttgtgaaaaggctggactttatatccaatct ttgaagcattactcagagttacctgatattaaacgtgtaattgtgaacacacatgctatt gagccgcaggctcttgtcgagttttttggtactctttctagcgagtgggctatggagtgc atgaaggatcttctgctggtcaaccttagaggcaaccttcagataatagttcaggcttgc aaggagtactgtgagcaacttggtgtcgattcatgcattaaactctttgagcagttcaag tcgtatgaagggctatactttttcctaggttcatatttgagtatgagtgaggatcctgag attcacttcaaatacattgaagcagctgccaagacgggtcaaataaaggaagtcgagcgt gtcactagagagtctaacttttatgatgctgaaaagacgaaaaactttttgatggaggct aagcttcctgatgcccgtcctttgataaatgtctgcgaccgttttggctttgtacctgat cttactcattacctgtacacaaacaacatgcttcgttacattgaaggctacgtgcagaag gtgaaccctgggaatgctcccttagttgtggggcagttgcttgatgacgaatgccctgaa gattttataaaaggcctcattctttctgttcgttcgttgcttcctgttgaaccccttgtt gaggaatgcgagaagagaaatcgactgcgtctcctcactcagttcttggagcatctagtt agtgagggaagccaagatgtccatgtccataatgccttgggtaaaattatcatagacagt aacaacaaccctgagcatttcctgaccaccaatccttactacgactctaaagttgtgggt aagtactgtgagaaacgtgatcccaccctggctgttgtggcatacagaagaggacaatgt gatgaggaactcatcaatgtcaccaacaagaactcattgttcaagttacaagccaggtat gtagtggagaggatggatggtgacctctgggataaggttcttatggaagaaaatgaatat agaagacaacttattgaccaagttgtgtctactgctttacccgaaagcaagagcccagag caagtttctgcagctgttaaagcattcatgactgctgatctgccacatgagcttatcgag cttcttgaaaagattgtgcttcaaaattctgcattcagcggaaactttaatctgcaaaat ctacttatactgacagctatcaaggcagatccgtctagagttatggattacattaacagg ctggataactttgatggtccggctgttggagaagtggcggttgatgcccaattatatgaa gaagcatttgcgattttcaagaagtttaacttaaatgttcaggctgtcaacgtattgctg gataacgtcagaagcattgagcgtgctgttgagtttgctttccgggtcgaagaagattct gtttggacccaagtcgccaaggctcaactcagggatgggctagtcagtgatgcaattgaa tcttttatccgagctgatgatgccactcatttcttggaggtcatacgtgctactgaagat gctaatgtctatgatgacttggtcagataccttcttatggttagacagaaggtgaaggaa cccaaggttgatagtgagctcatatatgcctatgcaaagattgaaaggttgggtgagata gaggaatttattctgatgccaaacgttgctaacctacaacaagtgggtgatcgcctgtat gatgaagctttgtacgaggctgcaaaaataatttatgcgttcatatcgaactggggcaag ttagccgtcacgcttgtgaagttgcagcagttccaaggtgctgtggatgctgcaaggaaa gccaacagtgcaaagacatggaaggaagtctgctttgcttgtgttgatgcagaagaattc cgactggctcaaatatgtggacttaacattatcatacaggtggatgacctggaagaagtc agcgagttctaccagaacagaggatgcttcaatgaattaatctcacttatggagagtgga cttggtctggaacgggctcacatggggatcttcaccgagttgggtgtactgtacgccaga tatcgttatgagaagcttatggaacacatcaagttgttctccactcgtctcaatattcca aagcttatacgagcctgtgatgagcaacagcattggcaggaacttacctatctgtacatt caatacgatgagtttgataatgctgcaacgactgtcatgaaccattctcctgaagcatgg gagcacatgcaattcaaagacattgtcgccaaggttgcgaatgtcgagctttactacaaa gccgttcacttctacttgcaagagcaccctgatataatcaacgatcttctcaatgtgctt gctctgcggttagatcacacacgagtggtggatatcatgcgcaaggctggtcagctgcgc cttatcaagccctacatggttgcagttcagagcaacaatgtttctgctgtaaatgaagcg ctgaatgagatatacgtagaagaagaagactacgataggttgcgcgagtctattgatttg catgacagctttgaccagataggcctcgctcagaagattgagaaacacgagcttgtggaa atgagacgtgtggctgcgtatatctacaagaaagctggtagatggaagcaatcaattgcg ttgtctaagaaagataacatgtacaaggactgtatggaaactgcttcacaatccggcgac catgacctcgcagaacaacttctggtttatttcattgaacagggtaaaaaggaatgcttt gccacatgtctctttgtctgttatgacttaatccgaccagatgttgctctggaacatgct tggatcaacaatatgctcgactttgccttcccgtatctcctccagtttatccgagaatac tctgggaaagtggatgaactaatcaaggacaaactagaagcacagaaggaagtgaaggcc aaagagcaggaagagaaggatgtcatgtcccaacagaatatgtacgcccaattattgcca ctggctctacctgccccaccgatgccaggaatgggaggtggtccagggatgggaggcggt tacggtccgccaccacagatgggagggatgcctggaatgccaccaatgccaccaatgcca ccatatggaatgccaccgatgggaggctactaa

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