Raphanus sativus (radish): 108859199
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Entry
108859199 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108859199 isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03460
Fanconi anemia pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108859199
09124 Replication and repair
03460 Fanconi anemia pathway
108859199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108859199
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108859199
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108859199
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108859199
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
108859199
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_C
FANCL_d2
FANCL_d3
zf-rbx1
zf-RING_2
SLX1_C
PHD_NSD
zf-RING-like
RWD
Motif
Other DBs
NCBI-GeneID:
108859199
NCBI-ProteinID:
XP_018488573
UniProt:
A0A6J0NXZ7
LinkDB
All DBs
Position
5:32444774..32446738
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AA seq
298 aa
AA seq
DB search
MEESIGRARCEELAKSSSSFYRKVYSEIEEVGWESLRRLGGDLTFFSFHILDKKGRAHIL
ELQLDRDYPKSPPSLSADVPCMFTLEWSTISRLKDVMHQFRKHLDSLQEFWSVLDDIDKS
LCVVDAKQPSRASPIRRIRAGKDCNIIARINFDDPKSLPECRFIGPEPVAVNYLYMIWRR
NSRKWSKEKSFPENLECVLGTELPKPLGLQVEDDHQQVECGICYAQFLPTDEELGARSGT
RTDYSCENISCNKSFHSLCLTDWLRSITTTRQSFDVLFGNCPYCSDPVAVKINMNKID
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtcaataggacgtgcgagatgcgaggaactagccaaatcatcgtcctccttc
taccggaaagtttactcggagatagaggaagttggatgggaatcactgaggaggttaggt
ggagatttaacgtttttcagctttcacattctagataagaagggaagagcacacatctta
gaacttcaactcgatagagactatcctaaatccccaccttctctttccgcggatgtgcca
tgcatgtttactttagaatggtcaacaatttcaaggctgaaggatgtgatgcaccagttc
cgaaagcatctggacagtcttcaagagttttggtctgtcttggacgatatcgacaagtct
ctttgtgttgttgatgctaagcagccatctcgtgcttctcctatccgtcggattcgtgct
gggaaggattgcaacatcattgctcgtatcaacttcgatgaccctaaatccctaccagag
tgccggtttattggtcctgagcctgtagctgtgaactacttgtatatgatatggaggaga
aatagcagaaaatggtcaaaggaaaaatcattccctgagaacctcgaatgtgttctaggt
actgagcttccaaagcctctaggtctccaagtggaagatgatcatcagcaagttgaatgc
gggatttgctatgcccagtttctaccaaccgatgaggagctcggagctagaagtgggacg
cgaacggactactcatgcgaaaacatcagttgcaacaagtctttccatagcctttgcctc
acagactggttaaggtctatcacaacaacaagacagtcatttgatgttctatttgggaac
tgcccttactgttcagacccggtcgcagtcaaaattaacatgaacaaaatagattag
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