Raphanus sativus (radish): 108859207
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Entry
108859207 CDS
T06014
Name
(RefSeq) ABC transporter G family member 29
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108859207
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108859207
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
108859207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_25
AAA_16
AAA
AAA_33
AAA_28
ABC2_membrane_3
RsgA_GTPase
nSTAND3
Motif
Other DBs
NCBI-GeneID:
108859207
NCBI-ProteinID:
XP_018488585
UniProt:
A0A6J0NW09
LinkDB
All DBs
Position
5:6579786..6588453
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AA seq
1413 aa
AA seq
DB search
METLSRSLSKRFGELLTGSSNHFSGRSGSIDDNDEEALKWAALEKLPTFTRLRTTIIQPH
DFVDVTKLGVDDRQKFIDSIFKVTEEDNEKFLKKLRKRIDRVRIKLPTVEVRFEKLTIEA
DCHIGKRALPTLPNVALNIAGRGLSLFGFNFAKTTKLTILRDASGIIKPSRMTLLLGPPS
SGKTTLLLALAGKLDPSLKVTGRVTYNGHGLEEIVPQKTSAYISQNDVHIGVMTVQETLD
FSARCQGIGTRYDLLSELVRREKDAGILPEPEVDLFMKSIAAENVKSSLITDYTLKILGL
DICKDTVIGDQMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLKE
MVRFTDATVLMSLLQPAPETFELFDDIILLSEGQIVYQGPRDHILSFFEACGFKCPERKG
AADFLQEVSSRKDQEQYWADTTKPYRYIPVSEFSKQFRTFHVGANLENDLSVPYDRFNSH
PASLVFSKQSVPKSQLFKICWDRELLLIKRNAFFYVFKTVQIIIMALIASTVYLRTGMGT
KDENDGAVYIGALMFSMIANMFNGFAELSLMIQRLPVFYKQRDLLFHPSWTFTLPTFLLS
IPVSIFESVVWVSITYYLIGFSPEPSRFFKHLLVIFLTQQMAGSIFRFIATTCRSMILAN
TGGSLVVLLLFLLGGFIVPRGEIPTWWQWAYWVSPMTYSYDALTVNEMLAPRWMDQPSSD
NSTRLGLAVLKIFDVFSDPSWYWIGVGAVLGFTILFNILATLALAYLNPLEKPQAIVSKE
SPEENRAINGTESKNTYVKRGMVLPFTPYTMSFDNVNYYVDMPMEMKEEEVAKDKLQLLR
EVTGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKRQETFARVSGY
CEQNDIHSPQVTVRESLIYSAFLRLPKEVTKDEKMRFVDQVMELVELKSLKDAIVGLPGI
SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH
QPSIDIFEAFDELLLMKRGGQVIYAGPLGQNSHKIIEYFQAIPGVPKIKEKYNPATWMLE
VSSLAAEAKLEIDFAEHYVTSSLYQQNKKLVKEVSTPPQGAKDLYFSTQFSESLLGQFKS
CLWKQWITYWRTPDYNLARFFFTFVAALMVGSIFWRVGTTRDTANDLTKVIGAMYAAVLF
VGINNASSVQPLVAVERTVFYRERGAKMYSALPYALAQVVCEIPYVLIQTTYYTLVTYAM
MCFEWTLVKFFWFFFVSFFSFLYFTYYGMMAVAITPNQQVAAIFAGAFYGLFNLFSGFLI
PRPRIPKWWIWYYWICPVAWTVYGLIVSQYGDQEDTIKVPGMMEDPTIKWYIENHYGYDP
NFMGSIAAVLVGFTVFFAFMFAFGIKMLNFQNR
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggagacgttgtcgagaagcctgagcaagagattcggagagttgttaacgggcagtagt
aatcatttctcagggagaagcggttctatcgatgataatgatgaggaagctcttaaatgg
gctgctcttgagaaacttccaaccttcactcgtcttcgtaccactatcatccaacctcat
gatttcgttgacgtcacaaaactcggcgttgatgatcgtcagaagttcattgactctatc
tttaaagtcaccgaggaagacaatgagaagttcttgaaaaagttgaggaaacgaatcgat
agggtgcggataaagctaccgaccgtggaagtgagattcgagaaattgacaatagaggcg
gattgtcacatcggaaaaagagctcttccgacgttacctaacgttgcattaaacattgct
gggagaggccttagtttatttggttttaactttgctaaaaccactaaactcactatcctt
agagacgcttctggtatcattaaaccttcaagaatgacacttttattaggtccaccatca
tcagggaaaacaactcttttgttggcgttagctggaaaattagacccaagcttaaaggtg
acggggagagtaacatacaatgggcacggattagaagagattgtaccacagaaaacatca
gcttacataagccaaaacgatgttcatattggagtgatgactgtccaagagactcttgat
ttttctgctaggtgccaaggcatcggcactagatacgatttgttaagtgagttggtgagg
agagaaaaggacgcagggatcttacccgaaccggaagtggatctcttcatgaagtccatc
gcagctgagaatgtaaagagcagtctcatcacagattacactctcaaaatattggggctt
gacatatgcaaagatacggtgatcggagaccaaatgataagaggaatctcgggtggtcaa
aagaagcgagtcacaacaggtgaaatgatcgtgggaccaacaaagacactgttcatggac
gagatatctacaggtctagacagttcaacaacttaccaaatagtgaaatgccttaaagag
atggttcgcttcacggacgcaacggttttaatgtccttgttacaaccagctcctgaaacg
ttcgagctctttgacgatattattctattatcggaaggccagatcgtgtaccaaggtccg
cgtgaccatattctttccttctttgaggcttgcggtttcaagtgtcccgagcgcaaaggc
gccgccgatttcttgcaagaggtatcttcaaggaaagaccaagaacagtattgggcagac
acgacaaaaccttacagatacattcctgtctccgaattctccaaacagttcagaaccttt
catgtcggagccaatcttgaaaacgacctgtccgtcccttacgacagattcaactcacat
ccagcttctctcgtattcagcaagcaatcagttcccaaatctcaactcttcaagatctgc
tgggacagagaactgcttctcataaaacgcaatgctttcttctacgttttcaagaccgtt
cagatcattataatggccttgattgcgtctaccgtgtacttgaggacggggatgggaaca
aaggacgagaatgacggagccgtctacattggtgcattgatgttctccatgatcgctaac
atgttcaatgggtttgccgagctttctctgatgattcaaagacttcccgtgttctacaag
caacgtgaccttttgtttcacccttcttggaccttcacccttccaacatttctcttgagc
attcctgtctccatattcgaatccgttgtttgggtcagcattacatattacttgatcgga
ttttctccagaacctagcaggttcttcaagcatttactggtgatatttcttacacagcaa
atggctggtagtatttttcgattcattgcgacaacttgtagatcaatgatacttgctaat
acgggaggatctctagttgttctcctcctcttcttacttggagggttcattgttcctaga
ggtgagattcctacatggtggcaatgggcttattgggtttcaccaatgacttacagttac
gatgcgttaaccgtcaatgaaatgcttgctcctagatggatggatcaaccgtcttctgat
aactccacgaggttggggttggctgttcttaagattttcgatgtattctcggacccaagc
tggtactggatcggtgtaggagccgttctcgggtttacgattctctttaacatcctagct
actctcgctcttgcatacctaaacccacttgagaaacctcaagccatcgtttctaaagag
agtccagaggaaaatagagcgataaatggaacagagagtaaaaacacttacgtgaaaaga
ggaatggttctaccttttactccttacacaatgtccttcgacaacgtcaactactacgtg
gacatgcctatggaaatgaaagaggaagaagttgccaaggataagcttcagctgctaagg
gaagtgacaggggtgtttaggccaggggtgttaacagctctgatgggagtaagtggagct
ggtaaaaccactttaatggatgttttggctggtagaaagaccggcggatacatcgaaggc
gacatcagaatctctggctttcctaaaagacaagaaacttttgccagagtctctggttat
tgtgaacagaatgatatccattcaccgcaagtcactgtcagagagtctctcatctactct
gctttccttcgtctcccaaaagaagtcaccaaagatgagaaaatgagatttgtggaccaa
gtgatggagttagtagagttaaagagtctaaaagatgctatagtggggcttccagggatc
tcaggcctatcaacagaacagaggaagagacttacgatcgcagttgagttagtagcgaac
ccatcgataatctttatggatgagcctacttcagggcttgacgctagggctgcagcgatt
gtgatgaggacggtgaggaacacagttgacacaggaagaactgttgtctgcacaatccac
cagcctagcattgacatctttgaagcttttgatgagcttctgcttatgaagagaggagga
caagtgatttacgctggtcctttaggccaaaactcccacaagattatcgaatatttccag
gcgattcctggagttccgaaaattaaagagaagtataatccggcgacatggatgctagaa
gtaagctcacttgctgcagaagctaagcttgagatagattttgctgagcattacgttaca
tcatccttataccaacaaaacaagaagcttgtaaaggaagtaagcacaccgccacaagga
gcaaaagatctctatttctcaacgcagttctcagaatcgttgttaggacaattcaaatct
tgtctgtggaaacagtggataacttactggagaactccagactacaatctagctaggttt
ttctttacatttgttgccgctctcatggtcggatcaattttctggagagttggcacaaca
agggacactgcgaatgatcttacaaaggttattggagcaatgtatgctgctgttttattc
gtgggaataaacaatgcatcatctgttcagccactcgtagcagtggaaagaactgtgttc
tatcgagaaagaggtgctaaaatgtactctgctttaccctatgccctagcacaggtggtg
tgtgaaataccgtatgtgctgatccaaactacgtattatacgttagttacatacgcaatg
atgtgtttcgaatggaccctggtcaagttcttttggttcttctttgtatcattcttctcc
ttcctctacttcacatactacgggatgatggctgtcgccatcacaccgaaccagcaagtc
gcagctattttcgccggagctttctacggtcttttcaacctcttttctggttttctcatc
cctagaccgaggattcccaaatggtggatatggtactactggatctgtccagtagcttgg
actgtgtatggattgattgtttcacagtatggtgaccaagaggatacgatcaaagtcccg
ggtatgatggaagatccgacgataaaatggtacattgagaatcattacgggtacgacccg
aactttatgggctctattgctgctgtgttagtgggcttcaccgtgtttttcgcttttatg
tttgccttcggcatcaaaatgttaaacttccagaacagatag
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integrated database retrieval system
