Raphanus sativus (radish): 108859230
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Entry
108859230 CDS
T06014
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108859230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108859230
Spliceosome [BR:
rsz03041
]
Common components
Common spliceosomal components
SR proteins
108859230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
Cornifin
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
108859230
NCBI-ProteinID:
XP_056866335
UniProt:
A0A9W3DR82
LinkDB
All DBs
Position
5:3332170..3334543
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AA seq
301 aa
AA seq
DB search
MVFADFKMPRYDDRYSSNDRYGGARLYVGHLSSRTRERDLEHLFSKYGRIRDLDMKRDYA
FIEFSDPRDADDARYRLDGRDFDGSRITVEFARGTPRGSREFSSSRGPPPGSGRCFNCGL
EGHWARDCSAGDWKNKCYRCGDRGHIERNCKNSPKKLRRDASYSRSPVRSRSRSPRRRRR
SPSRSYSRDRSYSRSRSPVRKEKDHSPEAARSRSPETARSRSPEAARSRSPEPMADNSPP
SKDRKRSLTPEEGSPMREKNSPKENELSPRGNDDGGIGTNEQDRSPSPREDRSPVEDVDE
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
atggtttttgctgactttaagatgcctcgctacgatgatcgttacagcagcaatgaccga
tacggcggcgcacgtctctatgtgggacacctctcctctcgaacaagggaacgagatctt
gaacacctcttcagcaaatacggaagaattcgagatttggacatgaagcgagactatgcc
ttcattgaattcagtgatcctagagatgctgatgatgcgaggtacagactggacggaaga
gactttgatggaagccgtatcactgtcgagtttgccagagggacacctcgtggttcccgg
gagttttcctcgagcagaggccctcctccagggagtggtcgttgcttcaactgtggtctt
gaaggtcactgggctcgagattgctctgctggtgactggaagaacaaatgttatcgttgt
ggagataggggtcacatcgagaggaactgcaagaacagtcctaagaagctcaggcgggac
gcaagttactcaagatcgccggttaggtctcggtctaggtctcctcgtcgcagaagaaga
agccccagcagaagctatagccgcgaccgtagctacagccgctccaggtcaccggttagg
aaggaaaaggatcatagtcctgaagctgcaagaagcagaagccctgaaactgcaaggagc
agaagccccgaagctgcaaggagcagaagccctgaaccaatggcggacaactctcctcca
tccaaagataggaagcgaagtctgactcctgaagaaggcagcccaatgcgtgagaagaac
agccccaaggagaatgaattgagcccgagaggaaacgatgatggcggtattggaaccaat
gagcaagaccgaagtcctagtcctagagaagaccgtagccctgtggaggatgttgatgag
cagtga
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