KEGG   Raphanus sativus (radish): 108859231
Entry
108859231         CDS       T06014                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03082  ATP-dependent chromatin remodeling
rsz03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108859231
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108859231
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rsz01009]
    108859231
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rsz03021]
    108859231
   03036 Chromosome and associated proteins [BR:rsz03036]
    108859231
Protein phosphatases and associated proteins [BR:rsz01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108859231
Transcription machinery [BR:rsz03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     108859231
    SWI/SNF complex
     108859231
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    108859231
   PBAF complex
    108859231
   SWI/SNF complex
    108859231
SSDB
Motif
Pfam: SNF5 Malt_amylase_C
Other DBs
NCBI-GeneID: 108859231
NCBI-ProteinID: XP_018488615
UniProt: A0A6J0NW43
LinkDB
Position
5:complement(7158664..7160728)
AA seq 239 aa
MKASGSSGWKGPVKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDSEILVFARRTV
KDLKLPQAFNTQISQSIQSQLADFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDL
NNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAVQSVTSARESRLSKKSRRG
SDYGSASKAGLSMDLVKLFSFKSSVVRKRKDLDFYEPMVDMLTNEEVDALEGREERHAR
NT seq 720 nt   +upstreamnt  +downstreamnt
atgaaggcttcagggtctagtggttggaaaggtcccgtcaagttcaggatgcctactgca
gagaacttggtacctattcgattggacattcaattcgagggtcagcgttacaaagacgct
ttcacttggaacccttcagacccggatagtgagatccttgtcttcgccagaaggactgtt
aaagacttgaaacttccacaggcgttcaacactcagatttctcaatctattcagtctcag
ctcgcagattttagagcatatgaaggacaagatatgtacactggtgaaaaaatcatacca
atcaagcttgatctccgagttaaccataccctcatcaaggatcagtttttgtgggaccta
aacaattttgagagtgatcctgaggaatttgcaagaaccttgtgtaaggatttaggtgtt
gaagatcctgaagttggccctgctgttgcctttgccatcagagaacaactttacgagatt
gcagttcaaagtgtaacttcagctagggagagtaggttaagcaagaaaagccgcagagga
tctgattatggttcagcgagcaaggctggcttgtcaatggacttagtgaaattattcagc
tttaagtccagtgtagttcggaaaaggaaagacttggatttttatgaaccaatggtggat
atgctaacaaatgaggaagtcgatgctcttgaaggcagagaagagaggcatgcaaggtga

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