Raphanus sativus (radish): 108859282
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Entry
108859282 CDS
T06014
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03030
DNA replication
rsz03410
Base excision repair
rsz03420
Nucleotide excision repair
rsz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108859282
03410 Base excision repair
108859282
03420 Nucleotide excision repair
108859282
03430 Mismatch repair
108859282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsz03032
]
108859282
03036 Chromosome and associated proteins [BR:
rsz03036
]
108859282
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108859282
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108859282
DNA Replication Termination Factors
ELG1-RFC complex
108859282
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108859282
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108859282
Check point factors
HRAD17(Rad24)-RFC complex
108859282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_11
AAA_16
AAA_5
AAA_14
ResIII
DEAD
SLFN-g3_helicase
AAA_24
nSTAND3
PhoH
AAA_28
AAA_19
AAA_7
AAA_30
AAA_2
RNA_helicase
Parvo_NS1
AAA_assoc_2
AAA_25
DUF815
NPHP3_N
IstB_IS21
TIP49
AAA_18
bpMoxR
NB-ARC
Motif
Other DBs
NCBI-GeneID:
108859282
NCBI-ProteinID:
XP_018488676
UniProt:
A0A6J0NWP3
LinkDB
All DBs
Position
1:9554419..9557909
Genome browser
AA seq
339 aa
AA seq
DB search
MAPVIQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSSNRQGGYPCPSFKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
NRILHICNEEGLNLGGEALSTLSIISQGDLRRAITYLQSGARLFGSTITSTDLLNVSGVV
PLEIVKRFFTACRSGDFDIANKEVDNIVAEGYPASQIINQLFDIVVEAGDDITDNQKAKI
CKCLAETDKRLVDGADEYLQLLDVASNTITALSEMAQDY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagttattcagagctcacaaccatgggttgagaaataccggccgaagcaagtg
aaggacgtggcgcatcaggaggaggtggttcgagtactcaccaacactctcgagactgct
aactgtccgcacatgctcttttatggaccaccaggaaccgggaaaaccactaccgcactt
gccatcgcccaccagctatttggacctgagttgtacaagtctagggtgttggagctgaat
gcaagtgatgacagagggattaatgttgttcggacgaagatcaaggattttgctgctgtt
gctgttgggtccagtaaccgtcaaggtggttatccttgcccatcgtttaagatcattatc
ctagatgaggctgattcgatgacggaagatgctcagaacgccttgaggcgcacaatggaa
acttactccaaagtcaccagattcttcttcatatgtaattatatcagcaggatcatagag
ccccttgcttcaagatgtgccaagttcaggtttaaaccactttctgaagaagtcatgagt
aaccgtatcttgcatatttgtaatgaagaaggtctcaaccttggtggagaggctctttca
actttgagtatcatatcacaaggtgatctccgtagggccatcacgtatctgcagagtggt
gctcggttgtttggatcaacaataacttcgacggatttactcaatgtgtctggggtagtc
cctctggagatagtgaagagattttttactgcatgcagaagtggtgatttcgatattgca
aacaaggaagtggacaacatagttgcagaaggatatcctgcatctcaaatcatcaatcag
ttatttgatatagtcgttgaagctggtgatgacataacggacaatcaaaaggctaagatc
tgcaaatgtctagctgaaacagataagcgacttgtagatggtgcggatgagtacctgcag
cttctggacgtggcaagcaatacaattactgcactctcagaaatggctcaagactactaa
DBGET
integrated database retrieval system