KEGG   Raphanus sativus (radish): 108859346
Entry
108859346         CDS       T06014                                 
Name
(RefSeq) sm-like protein LSM1B isoform X1
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108859346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108859346
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108859346
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     108859346
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 108859346
NCBI-ProteinID: XP_018488742
UniProt: A0A6J0NVC3
LinkDB
Position
5:5366631..5368300
AA seq 129 aa
MSSWAGPEDIYLSTSLASYLDRKILVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGE
QYCDIPLGLYVIRGENVVLIGDLDTEREELPPNMIRVSETEIKRAQKVEREASELRGTMR
KRMEFLDFD
NT seq 390 nt   +upstreamnt  +downstreamnt
atgtcttcttgggctggtcctgaagatatttacctttcaacttcactagctagctatctc
gatagaaagatacttgtgctccttagagatggtagaaagctaatgggaaccctccgttca
tttgatcaatttgccaatgcggttttagaaggtgcttgtgaaagggtaattgttggtgag
caatactgcgatatccctttaggcctctatgtaatccgtggagagaatgttgttctgatt
ggtgacctggacacggagagagaggagcttcctccaaatatgattcgcgtctcagagacc
gagattaaaagggcgcaaaaagtggagagggaagcgagtgagctgagaggaacaatgagg
aagagaatggagtttctcgacttcgattaa

DBGET integrated database retrieval system