Raphanus sativus (radish): 108859433
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Entry
108859433 CDS
T06014
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108859433
Spliceosome [BR:
rsz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108859433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
FlgA_N
Motif
Other DBs
NCBI-GeneID:
108859433
NCBI-ProteinID:
XP_018488836
UniProt:
A0A6J0NX48
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MSSSQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRNQAFVEFAE
LNQAISMVSYYASSSEPAQIRGKTIYIQYSNRHEIVNNQSPGEVPGNVLLVTFEGVESHH
VSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPKYLLPEH
VASCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVETQSN
VLLALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIATAAIAKEALE
GHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVGQKVPGVAEASAPTTGG
WQNGQVQTQYAGYGGSSYMYPSADPTGASPSSGHPPYYG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctcacagttccggtacacgcagacgccgtcgaaggtggtgcacctgcggaat
ctaccgtgggaatgcgtggaagaagagctcatcgacctgtgcaaacgattcggaaagatc
gtcaatacgaagaccaatgtcggcgccaatcgcaaccaagccttcgttgaattcgctgag
ttgaatcaggcgatatcaatggtttcgtattatgcttcatcttcggagccggcacagatt
cgtgggaaaactatttatatacagtactctaatcggcatgagattgtgaacaatcagagt
cctggtgaagtccctggaaacgtcctcttggttacctttgaaggagtcgaatctcaccat
gtcagcatcgatgtcatccatctggtgttttctgcttttggattcgtgcacaaaattgcc
acttttgagaaagctgctggtttccaggcactagttcagtttactgatgtggagactgct
tcagctgcaaggagtgcgctagatggtagaagtatacccaaatatctgcttccagaacat
gttgcctcttgcaatttgcgaatgtcttattcagctcatactgatctaaacatcaagttt
cagtcccaccgtagcagggattacactaatccataccttccagtgaatcataccgcaatg
gacgggtctatgcagcctgctttgggtgctgatggaaagaaggtagaaactcagagcaat
gtcctgcttgctttaattgagaacatgcagtatgctgtcactgtggatgttcttcacacg
gtcttttccgcgtatggaactgtccagaagattgctatatttgagaagaatggttcaaca
caagccttaattcaatactctgatatagcaacggcggcaatagcgaaagaagcactggaa
ggacactgtatatatgacggtggctactgtaagcttcgactatcatactctcgtcatact
gatctcaatgtaaaggcatttagcgacaaaagcagagactacacactacctgatctgagc
ctactcgtgggccaaaaagttcccggagtggctgaagcttctgcgccaacaacagggggt
tggcagaatgggcaggtgcaaacacaatacgcaggttatggtggaagttcatatatgtac
ccatcagctgatcccacaggggcttcaccttcttctggtcatcctccttactatggttga
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