Raphanus sativus (radish): 108859472
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Entry
108859472 CDS
T06014
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108859472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108859472
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
108859472
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
108859472
Prokaryotic type
108859472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
108859472
NCBI-ProteinID:
XP_056842302
UniProt:
A0A9W3BSQ0
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Position
5:complement(7757273..7759436)
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AA seq
327 aa
AA seq
DB search
MASSTSKTLMDFFQPAKRLKSSSSPFPAVSAAGRSRGFDSAAKSPPPRVTVADDSSGLTP
EQISRSDFNKSVAKSKRSLALCSEKVTKAKAEGNCCYVPLAELLVEESWLKALPGELDKP
YAKTLACFLEREIIVAEGKGSPIYPPQQLVFNALNTTPFDRVKAVIIGQDPYHGPGQAMG
LSFSVPEGEKLPSSLLNIFKELQKDVGCSIPRHGNLQKWAVQGVLLLNAVLTVRSKQPNS
HAKKGWEQFTDAVIRSISQQKEGVVFLLWGKYAQEKSKLIDGNKHHILTAAHPSGLSAHR
GFFNCRHFSQANQLLEQMGTAPIDWQL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcgacatctaaaaccctaatggactttttccaacccgccaaacgcctcaaa
tcctcttcttccccctttcccgccgtttccgccgccggtaggtcccgcggtttcgactct
gcagcaaaatcgccgccgccgcgcgtaaccgtcgccgacgactcgtccggccttacacca
gagcaaatctctcgctccgatttcaacaaatccgtagccaaatccaagcgcagcctcgcc
ctctgctccgagaaggtcacgaaagcgaaagctgaaggaaactgctgctacgtgccattg
gctgagctcttagttgaagaatcatggctcaaagctctccctggtgaattggataagccc
tacgccaagacccttgcttgtttccttgaacgtgagatcatcgtagctgagggtaaaggc
tctcctatttacccgccgcagcaattggttttcaatgctctaaatacaactccttttgat
cgagtgaaggctgttattatcggacaggatccttaccatggacctggtcaagctatgggt
ttgtctttctctgtgcctgaaggagagaagcttccttctagtcttttgaatatatttaag
gagcttcagaaagatgttggttgttcaatccctcgtcatggtaatctacagaaatgggct
gtgcagggtgttctgctgttgaatgctgttctcacagtaaggagtaaacagccgaattca
catgcaaagaaaggatgggaacaattcactgatgctgtcattcgaagtatctcacagcag
aaggaaggtgttgtctttctcctctggggaaaatacgctcaagagaaatccaagttgata
gatgggaataaacatcacattctcacagcagctcatccatctggtttgtctgcgcataga
ggcttcttcaattgcaggcatttctctcaagcaaaccagctactcgagcaaatgggcact
gcccctatagactggcaactctaa
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