Raphanus sativus (radish): 108859600
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Entry
108859600 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108859600
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108859600
Enzymes [BR:
rsz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
108859600
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108859600
Prokaryotic type
108859600
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
108859600
NCBI-ProteinID:
XP_018489013
UniProt:
A0A6J0NZB2
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Position
5:complement(22857805..22860619)
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AA seq
356 aa
AA seq
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MSDNLKHPLEDSASLERLSKVAKIEGEEEEGPVDSESELSMNPRAQRYLVAIEYIGTRFS
GSQQQPKDRTVVGVLQEAFHKFIGQPVKIFCSSRTDAGVHALSNVCHVDVERLSKRKPGD
VLPPHEPGVVQRAVNHFLQRNDGDVMVTDVRCVPSNYHARYKARERTYFYRLLSGSDPLS
ILEKDRAWHVPEELDLRSMQEACRVLVGSHDFTSFRAAGCQAKSPVRCLDEFNVMEVPST
PYFPSIMERAESNLNNGDDPLACSSQTKTETAGVTTNFGETFGVRRRHRCYVVTARARGF
LYHQVRLLVGALKCVGTGELTVSDVERILEAKTVSAAKPMAPASGLYLATVKYELP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataatctgaagcatcctcttgaggattcagcttcgctagagagactatcaaag
gttgcgaagatcgagggcgaagaagaagaaggaccggttgactctgagtcggagctatcg
atgaaccctagagcgcagcgttacttggttgcaatcgagtatataggaacgcgtttctcg
gggtcacaacagcagcctaaggaccgcaccgtcgtcggcgtattgcaggaggcttttcat
aagtttattggccagcctgtcaagatcttctgctcaagtcgaacggatgcaggagtgcat
gctctatcaaatgtttgccatgttgatgtggaacgcctcagtaaaagaaagcctggtgat
gtgttaccacctcatgaacctggtgtggtccagagagctgtgaaccatttcttacagaga
aatgacggtgatgttatggtgactgatgttcggtgtgtcccaagtaattatcatgccaga
tataaagcccgggagcgcacgtacttctaccgcttgctttcggggtcggatcctttatcc
atccttgaaaaagaccgtgcgtggcatgttcctgaggagctagatcttcgctctatgcag
gaagcatgcagagttctcgttggatctcatgactttacctccttcagggcagctggttgc
caggcaaagtcacctgtgagatgtttagatgaattcaatgtcatggaagtaccatcaaca
ccatattttccatctatcatggaaagggcggagagtaacctaaacaatggagatgatcct
ctcgcatgttccagccaaaccaagactgagactgctggtgttactacaaatttcggcgag
acttttggtgtaagaagacgacaccgctgctacgtagtaacagcgcgtgcccgcggtttt
ctgtaccaccaggttcgactgcttgtaggagcacttaaatgtgttggcactggagagttg
accgtttcagatgttgaacgaatcctggaggcgaagactgtgtctgcagccaaacccatg
gctcctgcatctggtctgtatctggcgactgtcaaatatgaacttccatga
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