KEGG   Raphanus sativus (radish): 108860182
Entry
108860182         CDS       T06014                                 
Name
(RefSeq) SART-1 family protein DOT2
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108860182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsz03041]
    108860182
   04121 Ubiquitin system [BR:rsz04121]
    108860182
Spliceosome [BR:rsz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    108860182
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    108860182
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108860182
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 108860182
NCBI-ProteinID: XP_018489588
UniProt: A0A6J0P0X0
LinkDB
Position
5:5811947..5812802
AA seq 217 aa
MSQLNIVMKKNSMRKNKKLVINIASIKKEGLASRFEADHKDLGSSIKNEKRRFESSERQR
DIVFDRRVCSKADEEIDHHGSRDRSSVRDGVMMREVDVGTGLSGALKLLREQGTFKEKSS
SKLVGVGDNHGKVDRFKDVFNDIRIDRVDEYGRILTEKEAFKKLCHGFHGKKLGKRKQEK
RIRIHEDSSKNILESSDRVVERMRLVHAELKSPYIIL
NT seq 654 nt   +upstreamnt  +downstreamnt
atgtctcagctcaatattgttatgaagaagaattcgatgaggaagaataagaaattggtt
attaatattgcttctataaagaaagaaggtcttgcttcaagatttgaagctgatcataag
gatcttggttcttcgataaagaatgagaaaaggaggtttgaatcatctgagagacaaaga
gatattgtgtttgatcgaagggtttgttccaaagccgatgaagagattgatcatcatggt
tcccgtgatcgttctagtgttagagacggagtgatgatgcgtgaggttgatgtcggcaca
ggattatctggcgcgttaaagcttctgagagagcaaggaactttcaaagagaaaagcagc
agcaagcttgtaggtgtgggagacaatcatggtaaagttgacagattcaaagatgtgttt
aatgatattaggattgacagggtggatgaatatggcaggatattgactgagaaagaagcg
tttaagaaactttgtcatggattccatgggaagaaacttgggaagaggaagcaagagaaa
cgaattaggatacatgaagatagctcaaaaaatatattggagtcttcagatagagttgtg
gagagaatgagactagtccacgccgagttgaagagtccgtacattattctctga

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