Raphanus sativus (radish): 108860314
Help
Entry
108860314 CDS
T06014
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI5
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108860314
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108860314
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108860314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
Ariadne
UBA_ARI1
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
108860314
NCBI-ProteinID:
XP_018489730
UniProt:
A0A6J0NZD2
LinkDB
All DBs
Position
1:480774..485513
Genome browser
AA seq
559 aa
AA seq
DB search
MDSDDDMLGAHEMGSGEDDFYSGDDDDYNESDGDETDYGFVEEDVDDSLLIASHRSQINY
VVLKEEDIRRLQMDDIGRVSMVLSITEAEASILLLHYHWSVSKVHDEWFADEERVRKAVG
ILERPLVSTPDGGEITCGICFESFIPEEIVSLSCGHPFCSTCWTGYTSTTINDGPGCLML
KCPEPSCPAAVGQDMFEKFASKEDREKYYKYFLRSYVEDNRKMKWCPAPGCEHAIEFAAG
TSNYDVSCLCSRSFCWNCTEEAHRPVDCHTVAQWIRKNSAESENMNWILANSKPCPKCKR
PIEKNHGCMHMTCTPPCKYEFCWLCLNAWTAHGERTGGFYACNRYESAKQEGLYDEAEKR
REMAKNSLERYTHYYERWASNQTSRQKALEDLEKTRLEKLEKLSDIQCTPESQLKFITEA
WLQIIECRRVLKWTYAYGYYLPDHDKKQFFEYLQGEAESGLERLHKCVEKELEDFITAEG
PSDDFNHFRTKLTGLTSITKTYFENLVKALENGLADVDTSTQGASSKSTSSKSSKTKGGV
VKGKGSSKNAGSSRNSDGN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggattcagatgatgacatgctcggtgcccacgagatgggatcgggagaggatgatttt
tacagcggtgatgatgatgattacaacgaaagtgatggtgatgagaccgattacgggttc
gttgaggaagacgtggatgattccctcttgatcgcctcccatcgctctcagataaattat
gttgttctcaaggaagaagatatccgcaggcttcagatggatgatattggaagagtttca
atggtactatccataaccgaggccgaagcgagcattttgcttcttcactatcactggagt
gtaagtaaagtacatgatgaatggtttgcggatgaggagagagttcggaaagctgttggc
atattggagagacctcttgtttcaacccctgacggcggagaaattacatgtggaatatgc
tttgaatcatttattcctgaagaaattgtatcgctttcttgtggtcatcctttctgctct
acctgctggactggttataccagtacaaccatcaatgatggcccaggatgcttgatgcta
aagtgtcccgagccttcttgtcctgctgctgttggtcaagatatgtttgaaaaattcgct
tccaaggaagacagagagaagtactataaatatttccttaggtcatatgttgaagacaac
agaaagatgaaatggtgtcctgccccagggtgcgagcatgcaattgagtttgctgccggg
actagcaattatgatgtttcctgcttgtgttcacggagcttttgctggaattgcactgaa
gaggctcaccgtcctgtggattgtcacacagtagcacaatggatacgtaagaacagcgct
gaatctgaaaatatgaactggatacttgcaaattcaaagccttgccccaagtgtaagcgg
ccaattgaaaagaatcatggatgcatgcacatgacatgcacacccccttgtaaatatgag
ttttgttggctttgccttaatgcgtggacagctcacggggaaagaactggtggtttttat
gcctgcaatcggtatgagtcggctaagcaagaaggactatatgatgaggctgaaaagagg
agagagatggcaaaaaattcgctcgagagatacactcattattatgaacgctgggcaagc
aatcagacgtcgaggcaaaaagctttggaggatctggagaaaactcgattggaaaagctc
gagaagcttagtgacatacagtgcactccggaatctcagctgaagttcatcacagaggcg
tggcttcagataattgaatgcagacgggtactgaaatggacatatgcatatgggtactat
ctacctgatcacgataagaaacaatttttcgagtatttgcaaggggaagctgagtcaggt
ttggagaggctccacaaatgcgtagagaaggaactggaggattttataactgctgaaggc
ccttccgatgacttcaatcatttccggacaaagctaactggtttgaccagcataacgaaa
acctactttgaaaatctggtgaaagctctggagaatggacttgctgatgtggatactagt
acgcaaggggctagcagcaaatcaacaagctctaaatctagcaagacaaaaggaggcgtt
gtgaagggtaaaggaagctccaaaaatgccgggtccagcagaaactctgatggaaactga
DBGET
integrated database retrieval system
