Raphanus sativus (radish): 108860687
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Entry
108860687 CDS
T06014
Name
(RefSeq) 15-cis-zeta-carotene isomerase, chloroplastic
KO
K15744
zeta-carotene isomerase [EC:
5.2.1.12
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00906
Carotenoid biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Module
rsz_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
108860687
Enzymes [BR:
rsz01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.12 zeta-carotene isomerase
108860687
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NnrU
PEMT
ICMT
Motif
Other DBs
NCBI-GeneID:
108860687
NCBI-ProteinID:
XP_018490049
UniProt:
A0A6J0NZE8
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Position
Unknown
AA seq
364 aa
AA seq
DB search
MAVYHLLLSTSPSLVLPPRRPNFSSIHRRIPPAHPRLTKFTTSPSSSPPVIRKILVRSTL
REDPVSPDADNPTLLIGEDSAAFELGKQKLVSWVYFGVILGVVLYILNVVWIDNSTGFGK
SYIDAVSAVSGSPEVAMLMLILIFATVHSGLASLRDVGEKLIGERAFRVLFAGVSLPLAM
STIVFFINHRYDGSQLWQLQGVPGVHEAIWFANFVSFFFLYPSTFNLLEVAAVDKPKMHL
WETGIIRITRHPQMVGQIVWCLAHTLWIGNSVAASASLGLIAHHLFGAWNGDRRLAKRYG
DAFEGIKKRTSVIPFAAIIEGRQVLPKDYYKEFVRLPYLAITALTVGAYFAHPLMQGASF
RLHW
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttatcatctcctcctctcgacctctccttcgcttgttcttcctcctcgccga
cccaacttcagctcaatccaccgccggataccaccagctcaccctcgtctcacaaaattc
accacctcgccttcttcgtctccaccagtaattcggaaaattctcgtccgcagcactctc
cgggaagaccccgtttctcccgacgcagacaatccaactctgctgatcggagaagactct
gctgctttcgaattaggcaaacagaagctcgtttcctgggtttatttcggcgttatcctt
ggagtcgttctctacatcctcaacgtagtctggatcgataactccaccggtttcggtaaa
tcatacatcgacgccgtctccgccgtctccggctcgccggaggtggcgatgttaatgctt
atactcatcttcgcaactgtgcacagtggattagctagtctcagagatgtaggagagaaa
ctcataggcgaaagagcgtttcgtgttctgtttgctggagtctctcttcctctagctatg
agcaccattgttttctttataaaccatagatacgatgggtcacagttatggcagcttcag
ggtgttccgggtgtccatgaagctatctggttcgctaactttgtctccttcttctttctc
tatccttctaccttcaatcttctcgaggtcgctgctgttgataaacccaagatgcatctc
tgggagactggcatcatcagaatcactcgtcaccctcagatggttggacaaatagtttgg
tgtttagcgcacactctctggattggaaactcagtagctgcatcggcgtctcttggtttg
attgcacaccatttgtttggggcgtggaatggagacaggagactagctaaaagatacgga
gatgctttcgaaggcatcaagaagagaacgagtgtgattccttttgctgccattattgaa
ggacgccaagttttgcctaaggattactacaaagagtttgttcggttgccttatcttgca
atcacggcgttaacagttggagcctattttgctcacccgctaatgcaaggtgcgagcttc
aggcttcattggtag
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