Raphanus sativus (radish): 108860777
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Entry
108860777 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: putative two-component response regulator ARR20
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108860777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108860777
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
108860777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
KaiA_N
Motif
Other DBs
NCBI-GeneID:
108860777
NCBI-ProteinID:
XP_056867234
UniProt:
A0A9W3DTU7
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Position
5:complement(28150348..28152265)
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AA seq
450 aa
AA seq
DB search
MSVSSNILKENSRDLLREEEPGDDEFEFPINDEDEELPTTSIRIVLVDSDPKSLCLMKNL
MTQFSYQVRDFKNGDEAIAFLMMSKHEIDLVIWDFHVPEINGLEALKTIRKEMDLPVVIM
SHEHRKETVMESTKRGSCNFLVKPVSKEIISVLWQHVYRKKISVYSAESDPGENVGLDQD
LYQTNKEDSSSGEQNSSYQKENKSKKPRMTWTSELHQLFEKAVEKMGGLERNHSHKTLVN
IQLFCMLISXLSYVLTMLNAEAVPKLILKCMQEEMDVGLTRNNVASHLQKYRLNSGKKSS
VLQETREDSQWRNAGPNTALTASKPLQNSSFNLHTRVPYFANDQDARNGSMQYPSTNYIT
TNNHFMTNSLAYLPYTDSFHHQQQQQQQQFQHQQYSHSSLQLPSITKQESPYVPAAMENP
DLIPNQNSPHIDWADYLQGGLSYFDKTNRY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtttcatcaaacatactcaaagagaattctcgcgacttgttgcgagaagaggaa
cctggtgatgatgaattcgaatttcccatcaacgatgaggacgaagagcttccgacaaca
agtattaggattgttttggtagactcagatcctaaatccttatgtctcatgaagaacctc
atgacacagttctcttaccaagtaagggattttaaaaacggagatgaagctattgctttc
ctgatgatgagtaagcatgagatcgatttagtgatatgggattttcatgtgcccgagatt
aatggactcgaagctctcaaaaccattcgtaaagagatggatttgcccgtagtaataatg
tctcatgaacaccggaaggaaactgtgatggaatcgacaaaacgtggctcatgtaacttt
cttgtgaagccagtgagcaaagaaataatttcagtactatggcaacatgtttaccgcaag
aaaatatctgtctattcagctgaatcagatccaggagaaaacgtcggtttagatcaagat
ctctatcagaccaacaaagaagactccagtagcggagaacaaaacagttcctatcaaaaa
gaaaacaagagcaagaaacctcgaatgacttggacatcagaacttcaccaactgtttgaa
aaagccgtcgagaaaatgggcggtcttgaacgtaatcattcacacaaaactcttgtgaat
attcagttattttgcatgttaatcagtntattatcttatgttttgacaatgttaaatgca
gaggcagttccgaagctgattctcaaatgtatgcaagaagaaatggatgtgggactcact
agaaacaatgtagccagtcatcttcagaagtaccgtctaaattcagggaaaaagtcatcc
gttctccaggagactcgagaagattctcagtggcgtaatgctggaccaaacaccgctctc
acggcttctaaaccgctacaaaactccagcttcaatctccatactagagtaccgtatttt
gcgaacgaccaagacgcaagaaacggctccatgcagtatccttcaaccaattacatcaca
acgaacaaccatttcatgaccaactctttggcttatctaccttatactgactcgtttcat
catcagcaacaacaacaacaacaacaatttcaacatcagcagtactcccattcttctctt
cagctaccttccataaccaagcaagagtctccatacgtgccagcagccatggaaaatccc
gatctcatccctaatcaaaattcaccccacatagactgggcagactatttacaaggagga
ctcagctatttcgataagactaatcgttattga
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