KEGG   Raphanus sativus (radish): 108860781
Entry
108860781         CDS       T06014                                 
Name
(RefSeq) zinc finger protein BRUTUS
  KO
K16276  zinc finger protein-like protein
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108860781
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108860781
SSDB
Motif
Pfam: zinc_ribbon_6 Hemerythrin zf-CHY zf-RING_2 PvuRts1I-like_N
Other DBs
NCBI-GeneID: 108860781
NCBI-ProteinID: XP_018490135
UniProt: A0A6J0P0F3
LinkDB
Position
5:7558942..7565093
AA seq 1256 aa
MATPLPDFETARGGGGGGGGVAASSSSSSSSTTVLTSTTTNTFTEGDGEEISPILIFLFF
HKAVCSELESLHRLALEFATGHHHVDLRLLRERYRFLRSIYKHHCNAEDEVIFSALDIRV
KNVAQTYSLEHKGESTLFDHLFELLNSATEIDESYRRELASSTGALQTSVSQHLAKEQKQ
VFPLLIEKFKHEEQAYIVWRFLCSIPVNMLAVFLPWLASSITIDESKEMQMCLSKIVPGE
KLLQQVIFTWLGGKNDTVASRGVEDSSFQCCLDSSSSMLPCKTSRAQCPCEGSKAGKRKY
PELTEFEAPDAPMHPIDEIKIWHKSINKEMKEIADEARKIQLSGDFSDLSAFDERLQYIA
EVCIFHSLAEDKIIFPAVDGEFSFSEEHDEEENQFNEFRCLIEKIKSAGASSTSAAEFYT
KLCSHADQIMETIQRHFHNEEIQVLPLARKNFSCKRQQELLYQSLCIMPLRLIERVLPWL
TASLTEDEAKNFLKNLQAGAPKSDAALVTLFSGWACKGRKAGECLSPKGNGLCPAKLLSN
IEEVYLQSCNACVSVPCPSRSIKACCQHQDKRPAKRTAVSTGGKNATPHSSEVSNGCKPS
GNGRSCCVPDLGVNSDCLGLGSLPAAKAMRSCSLNSAAPALNSSLFGWEMDSNSFETGHA
ERPVATIFKFHKAISKDLEFLDVESGKLIDCDETFIRQFIGRFHLLWGFYKAHSNAEDDI
LFPALESKETLHNVSHSYTLDHKHEEKLFGDIYSVLSELSVLHEKIQSDSMMGDVNQTDT
VQADIDSGDCKKKYNELATKLQGMCKSIKITLDQHIFLEELELWPLFDKHFSVQEQDKIV
GRIIGTTGAEVLQSMLPWVTSALSEDEQNRMMDTWKQATKNTMFDEWLNECWKGSPGSSS
MERAKPSLHRDNDHQEVLDQTGQLFKPGWKDIFRMNQNELEAEIRKVYQDTTLDPRRKDY
LVQNWRTSRWIAAQQKLPKETETALNGDVALGCFPTFRDPEEQIYGCEHYKRNCKLRAAC
CGQLFTCRFCHDKVSDHSMDRKLVTEMLCMRCLKVQPCGPICTTPSCEGFPMAKHYCSIC
KLFDDERAVYHCPFCNLCRVGEGLGIDYFHCMTCNCCLGMKLVNHKCLEKSLETNCPICC
EFLFTSSEAVRALPCGHYMHSACFQAYTCSHYTCPICGKSLGDMAVYFGMLDALLAAEEL
PEEYKDRCQDILCNDCERKGTTRFHWLYHKCGTCGSYNTRVIRSETTTLPDCSTSS
NT seq 3771 nt   +upstreamnt  +downstreamnt
atggcgacgccgttaccggatttcgaaacggcgagaggtggcggaggaggaggaggagga
gtagccgcgtcttcttcttcttcttcttcttcaaccacggtcctcacgagcactactact
aatacgttcacggagggggacggggaagagatttctccgatcctgattttcctcttcttt
cacaaggcggtgtgcagtgagctcgaatcgcttcataggctggcgctagagttcgccact
ggtcatcaccacgttgatctccgtctcctccgtgaacggtaccggttccttagatccatc
tataagcatcactgcaatgccgaggacgaggtgatcttttcagctcttgacatacgcgtg
aagaacgtagcgcagacgtattctcttgaacacaaaggtgaaagcacactcttcgatcat
ctttttgagctgcttaattccgccaccgagatcgatgagagttatcggagggagttggct
agcagtactggagcacttcagacctctgttagccagcacttggctaaagaacagaaacag
gtgttcccgttacttattgagaaatttaagcacgaggagcaagcttacatagtctggagg
tttctctgcagcattcctgtgaatatgcttgccgtgtttcttccgtggcttgcttcttcc
attacgattgatgaatccaaggagatgcagatgtgcttgagcaagattgttcctggcgag
aagctccttcagcaggttattttcacctggttgggagggaaaaacgatactgtggcttca
cgtggtgtagaagattcttccttccagtgttgtctagattcttctagcagcatgcttccc
tgcaaaacgagtagagcacagtgcccatgtgagggatccaaggccgggaagagaaagtac
ccagagcttaccgagtttgaagctcccgatgctcctatgcacccaattgatgagatcaaa
atttggcacaagtcaatcaacaaggagatgaaggaaatagccgacgaggctaggaaaatt
cagctgtctggagatttttcggatttatctgcatttgatgaacgcttgcaatatattgct
gaagtatgcatcttccacagtctcgcagaggacaagatcatatttcctgcagtagatggg
gagttttcattttccgaggagcacgatgaagaagaaaaccagttcaacgagtttcgatgt
ttaattgaaaaaatcaaaagtgctggagcgtcttctacttctgctgctgaattttacacc
aagctgtgctcacatgcggatcaaataatggaaaccattcaaaggcacttccacaacgag
gaaattcaggtgctacctcttgcacgaaagaacttcagctgtaaaagacaacaagagctt
ctctaccaaagcctgtgcataatgcccctaagattaattgaacgtgttttgccatggttg
actgcatctttaacagaagatgaagctaagaattttctgaagaacttgcaagctggagca
cctaaatcggatgctgctctcgttactcttttctctggttgggcatgcaaaggacgcaaa
gcgggggaatgcttgtctccaaaggggaatggtttatgtcctgctaaattactaagcaac
attgaagaagtctaccttcagtcatgtaatgcttgtgtgtctgtgccatgcccgagtagg
agtataaaagcgtgttgccagcatcaggataaaaggccagctaagcgaactgctgtgtcg
actggtggaaaaaatgctacccctcactcgtcagaagtctcaaatgggtgcaagccatct
ggaaatggtaggtcatgctgtgttccggatctcggagttaacagtgattgtctgggactt
ggttcccttccagcagccaaagctatgcgatcttgttcgctaaactctgctgcgcccgct
cttaattctagcctctttggttgggaaatggatagcaacagctttgaaactggacacgcc
gagcggccagttgctacaatattcaagtttcacaaggctattagcaaagatctggagttt
cttgatgttgaatctggaaagctcattgattgcgatgaaacgtttattcgtcagttcata
ggtcgatttcacctactctggggtttctacaaggctcatagtaatgcggaagatgatatc
ttatttccagctttggaatcgaaagagacgcttcacaatgtcagtcattcttacacgctc
gaccataaacacgaggagaagttgtttggagatatttacagtgttcttagtgaactctca
gttcttcatgagaagatacagagtgattctatgatgggggacgtaaatcaaactgacact
gttcaggctgatattgatagcggtgactgcaagaagaagtacaacgaactggctacaaag
ctacaagggatgtgcaaatccattaagatcacactggatcaacatatattcttggaggaa
ctggagctctggcctctatttgacaaacacttctccgttcaagagcaagacaagattgtg
ggtcgtataatcgggacaacgggtgctgaagttcttcaatccatgttaccatgggtgact
tccgcactttctgaagatgagcaaaatagaatgatggatacatggaagcaggcaaccaag
aacacgatgttcgatgaatggctcaatgaatgctggaaaggatcacccggctcatcctca
atggaaagagccaaacctagtctacacagagataatgatcatcaagaagtcttggaccaa
actggtcaactttttaagccgggttggaaagatattttccgcatgaatcagaacgaactg
gaggctgaaatcaggaaggtttatcaggacacaacactcgatccaaggagaaaagattat
ctagtacaaaattggagaactagtcgatggatagcggctcagcaaaagttacccaaggaa
acagaaactgcgttaaacggtgacgttgcacttggatgtttcccgacttttcgagatccc
gaggagcagatatatggatgcgagcactacaagcgcaactgcaagcttcgtgcggcttgt
tgtggtcagttgttcacttgtaggttttgccacgacaaagtaagcgaccactccatggat
agaaaattggtgacggaaatgctctgcatgcggtgcctcaaggtgcaaccttgtggcccc
atttgcacaacgccttcatgcgaaggattcccaatggcaaagcactattgcagcatttgc
aaacttttcgatgatgaaagagctgtttaccactgtccattctgcaacctttgccgggtc
ggtgagggactaggaatcgattattttcattgcatgacatgtaactgttgcctggggatg
aagttggtaaaccacaagtgcctcgagaaaagcctcgagacaaattgccccatatgctgt
gaatttcttttcacatcgagtgaagcagtcagagccttaccatgtggtcactacatgcac
tcagcttgcttccaggcttacacttgcagccactacacatgtccaatctgtggaaaatca
ttaggagatatggcggtttatttcggtatgcttgatgcactgttagctgcagaagaactt
ccagaagaatacaaagatcgctgtcaggacattttatgtaatgactgtgaacgcaaagga
acgacacggttccattggttgtaccataaatgcggcacctgcggttcttacaacacccgt
gtgatcagatcagaaacaacaaccctcccagactgctcaacctcatcctga

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