KEGG   Raphanus sativus (radish): 108861097
Entry
108861097         CDS       T06014                                 
Name
(RefSeq) protein ELC
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03250  Viral life cycle - HIV-1
rsz03272  Virion - Hepatitis viruses
rsz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108861097
   03272 Virion - Hepatitis viruses
    108861097
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108861097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108861097
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsz04147]
    108861097
Membrane trafficking [BR:rsz04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    108861097
Exosome [BR:rsz04147]
 Exosomal proteins
  Proteins found in most exosomes
   108861097
SSDB
Motif
Pfam: UEV Vps23_core UQ_con Init_tRNA_PT NDC80_loop CoV_S2
Other DBs
NCBI-GeneID: 108861097
NCBI-ProteinID: XP_018490424
UniProt: A0A6J0P0K1
LinkDB
Position
5:37671526..37672971
AA seq 398 aa
MVPSPSNPQQIQQFLSSVLSQRGPNSVPYDESTKWLIRQHLLNLISSYPSLEPKTATFIH
NDGRSVNLLQADGTIPMPYHGVTYNIPVIIWLLESYPRHPPCVYVNPTADMIIKRPHAHV
TPSGLVSLPYLQNWVYPSSNLVDLVSDLGAAFARDPPLYSRRRPVPSPSPPPSHDPSLTR
PPPPTAAADQRPFPPSPYGRVQHVHHNQHQQQQSDDAAEVYKRNAINKMVEMVHGDLSSM
RRDREAEAESLLSLQGGLRRREEEINRGLKEMVEEKETLEQQLQIISMNTDVLDSWVREN
QGKTKTLVDVDVDVDKVFECVDALSKQMLECTASDLAIEDAVYALDKGFQDGVVPFDQYL
RSVRLLSREQFFHRATGSKVRAAQMEAQVHAIAGRLHS
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggttccgtcaccgtcaaacccgcaacagatccaacaattcctctcctccgtcctctca
cagcggggcccaaactccgtcccatacgacgagtccaccaagtggctaatccgccaacac
ctcctcaacctaatctcgtcctacccttccctcgagcccaaaacggcgacgtttatccac
aacgacggccgatccgtaaacctcctccaagccgacggaaccatcccgatgccttaccac
ggcgtcacctacaacatccccgtcatcatctggcttttagaatcctaccctcgccaccct
ccctgcgtctacgtcaaccccaccgccgacatgatcatcaagcggccccacgcgcacgtc
accccctcgggcctcgtctccctcccttacctccagaactgggtctaccctagctccaat
ctcgtcgatctcgtctccgatctcggcgccgccttcgctcgcgatcctcctctctactcc
cgacgccgtccggtgccatctccgtctcctccgccgtcgcacgatccgtcactgacacgt
cctccacctccgacggcggcggcggatcagagaccgttcccgccgtctccttacggcaga
gtgcagcacgttcaccacaaccagcaccagcagcagcaatcggacgacgcggcggaggtt
tacaagagaaacgcgatcaacaagatggtggagatggtccacggcgatctctcctcgatg
cggagagacagagaagccgaggcggagtcgctgctgagtctgcagggaggtttgaggagg
agggaggaagagatcaacagagggttgaaggagatggtggaggagaaggagacgctcgag
cagcagctgcagatcatctccatgaacactgacgttctcgactcttgggttagggagaat
caagggaagactaagactttggttgatgttgacgtggatgtggataaggtctttgagtgt
gtggacgcgctctctaagcagatgctggagtgtactgcttcggatctggcgattgaagat
gcggtttatgcgttggataaggggtttcaggacggggttgttccgtttgatcagtacttg
aggagtgtgaggttgctttcgagggaacagttctttcatagagccacggggtctaaagtt
agggctgctcagatggaagctcaggttcatgccatcgctggtagattacattcgtga

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