Raphanus sativus (radish): 108861097
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Entry
108861097 CDS
T06014
Name
(RefSeq) protein ELC
KO
K12183
ESCRT-I complex subunit TSG101
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03250
Viral life cycle - HIV-1
rsz03272
Virion - Hepatitis viruses
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108861097
03272 Virion - Hepatitis viruses
108861097
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108861097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108861097
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108861097
Membrane trafficking [BR:
rsz04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
108861097
Exosome [BR:
rsz04147
]
Exosomal proteins
Proteins found in most exosomes
108861097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
Init_tRNA_PT
NDC80_loop
CoV_S2
Motif
Other DBs
NCBI-GeneID:
108861097
NCBI-ProteinID:
XP_018490424
UniProt:
A0A6J0P0K1
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Position
5:37671526..37672971
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AA seq
398 aa
AA seq
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MVPSPSNPQQIQQFLSSVLSQRGPNSVPYDESTKWLIRQHLLNLISSYPSLEPKTATFIH
NDGRSVNLLQADGTIPMPYHGVTYNIPVIIWLLESYPRHPPCVYVNPTADMIIKRPHAHV
TPSGLVSLPYLQNWVYPSSNLVDLVSDLGAAFARDPPLYSRRRPVPSPSPPPSHDPSLTR
PPPPTAAADQRPFPPSPYGRVQHVHHNQHQQQQSDDAAEVYKRNAINKMVEMVHGDLSSM
RRDREAEAESLLSLQGGLRRREEEINRGLKEMVEEKETLEQQLQIISMNTDVLDSWVREN
QGKTKTLVDVDVDVDKVFECVDALSKQMLECTASDLAIEDAVYALDKGFQDGVVPFDQYL
RSVRLLSREQFFHRATGSKVRAAQMEAQVHAIAGRLHS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggttccgtcaccgtcaaacccgcaacagatccaacaattcctctcctccgtcctctca
cagcggggcccaaactccgtcccatacgacgagtccaccaagtggctaatccgccaacac
ctcctcaacctaatctcgtcctacccttccctcgagcccaaaacggcgacgtttatccac
aacgacggccgatccgtaaacctcctccaagccgacggaaccatcccgatgccttaccac
ggcgtcacctacaacatccccgtcatcatctggcttttagaatcctaccctcgccaccct
ccctgcgtctacgtcaaccccaccgccgacatgatcatcaagcggccccacgcgcacgtc
accccctcgggcctcgtctccctcccttacctccagaactgggtctaccctagctccaat
ctcgtcgatctcgtctccgatctcggcgccgccttcgctcgcgatcctcctctctactcc
cgacgccgtccggtgccatctccgtctcctccgccgtcgcacgatccgtcactgacacgt
cctccacctccgacggcggcggcggatcagagaccgttcccgccgtctccttacggcaga
gtgcagcacgttcaccacaaccagcaccagcagcagcaatcggacgacgcggcggaggtt
tacaagagaaacgcgatcaacaagatggtggagatggtccacggcgatctctcctcgatg
cggagagacagagaagccgaggcggagtcgctgctgagtctgcagggaggtttgaggagg
agggaggaagagatcaacagagggttgaaggagatggtggaggagaaggagacgctcgag
cagcagctgcagatcatctccatgaacactgacgttctcgactcttgggttagggagaat
caagggaagactaagactttggttgatgttgacgtggatgtggataaggtctttgagtgt
gtggacgcgctctctaagcagatgctggagtgtactgcttcggatctggcgattgaagat
gcggtttatgcgttggataaggggtttcaggacggggttgttccgtttgatcagtacttg
aggagtgtgaggttgctttcgagggaacagttctttcatagagccacggggtctaaagtt
agggctgctcagatggaagctcaggttcatgccatcgctggtagattacattcgtga
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